Factsheet for VIT_12s0028g01820.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P14650_001	Banana	mitochondrion	86.05	84.85
PGSC0003DMT400052597	Potato	mitochondrion	85.11	84.71
Bra021682.1-P	Field mustard	mitochondrion	85.11	84.51
Solyc07g055210.2.1	Tomato	extracellular, mitochondrion, plastid	84.87	84.47
CDY58981	Canola	mitochondrion	84.87	84.07
CDX97776	Canola	mitochondrion	85.11	83.92
TraesCS7D01G369300.1	Wheat	mitochondrion	84.4	83.8
TraesCS7A01G353500.1	Wheat	mitochondrion	84.16	83.57
TraesCS7B01G274100.1	Wheat	mitochondrion	83.92	83.33
TraesCS6B01G026900.1	Wheat	mitochondrion	83.45	82.86
TraesCS6A01G018600.1	Wheat	golgi, mitochondrion	82.98	82.39
AT2G30970.1	Thale cress	mitochondrion	83.45	82.09
CDY10765	Canola	mitochondrion	82.03	81.84
Bra018286.1-P	Field mustard	mitochondrion	81.8	81.6
KRH55720	Soybean	mitochondrion	82.03	81.26
Os02t0236000-01	Rice	mitochondrion	82.98	81.25
TraesCS6D01G022800.1	Wheat	mitochondrion	82.51	80.97
Zm00001d016198_P003	Maize	mitochondrion	82.03	80.7
KXG29888	Sorghum	mitochondrion	81.32	80.0
CDY52691	Canola	mitochondrion	74.94	78.08
Os06t0548000-01	Rice	mitochondrion	84.4	77.11
HORVU6Hr1G003470.2	Barley	plastid	82.74	73.22
VIT_08s0058g01000.t01	Wine grape	mitochondrion	66.9	66.28
HORVU7Hr1G089290.4	Barley	cytosol	82.51	66.1
HORVU2Hr1G033320.4	Barley	cytosol	9.46	54.79
VIT_11s0016g03720.t01	Wine grape	cytosol	47.99	49.39
VIT_04s0008g03770.t01	Wine grape	cytosol	46.34	46.45
VIT_04s0008g06040.t01	Wine grape	cytosol, peroxisome, plastid	43.74	35.58
VIT_05s0020g03410.t01	Wine grape	cytosol	8.04	15.67

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	EntrezGene:100254127
wikigene:100254127	MapMan:25.1.7	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	EMBL:AM482143	InterPro:Aminotransferase_I/II
InterPro:Asp_trans	ProteinID:CAN73052	ProteinID:CAN73052.1	ProteinID:CBI22009	ProteinID:CBI22009.3	UniProt:E0CTU3
EMBL:FN595235	GO:GO:0003674	GO:GO:0003824	GO:GO:0004069	GO:GO:0005488	GO:GO:0005507
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006520
GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0030170	GO:GO:0046686	GO:GO:0080130	InterPro:IPR015421	InterPro:IPR015422	EntrezGene:LOC100254127
wikigene:LOC100254127	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879
PANTHER:PTHR11879:SF18	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	TIGR:TC58611
UniParc:UPI00015C9971	ArrayExpress:VIT_12s0028g01820	EnsemblPlantsGene:VIT_12s0028g01820	EnsemblPlants:VIT_12s0028g01820.t01	unigene:Vvi.3126	RefSeq:XP_002281764
RefSeq:XP_002281764.1	SEG:seg	:	:	:	:

Description

Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:E0CTU3]

Coordinates

chr12:-:2452881..2458665

Molecular Weight (calculated)

47301.8 Da

IEP (calculated)

7.883

GRAVY (calculated)

-0.287

Length

423 amino acids

Sequence
(BLAST)

001: MAFRTGISRR MMIRSGFGLR SMSSWWGSVE PAAKDPILGV TEAFLADPSP DKVNVGVGAY RDDNGKPVVL ECVREAERRI AGKLNMEYLP MGGSVNMVEE
101: TLKLAYGENS EFIKDKRIAA VQALSGTGAC RLFADFQKRF RPDSQIYIPV PTWANHHNIW RDAQVPQRTF HYYHPETKGL DFASLMDDVK NAPNGSFFLL
201: HACAHNPTGV DPSEEQWKEI SYQFKVKGHF AFFDMAYQGF ASGDPERDAK SIKIFLEDGH LIGIAQSYAK NMGLYGQRVG CLSLLCEDEK QAVAVKSQLQ
301: QIARPMYSNP PVQGALIVST ILGDPELKKL WLKEVKVMAD RIIGMRTALR ENLEKLGSPL SWEHITNQIG MFCYSGLTPE QVDRMTNEFH IYMTRNGRIS
401: MAGITTGNVS YLANAIHEVS KSA

Best Arabidopsis Sequence Match ( AT2G30970.2 )
(BLAST)

001: MALAMMIRNA ASKRGMTPIS GHFGGLRSMS SWWKSVEPAP KDPILGVTEA FLADPSPEKV NVGVGAYRDD NGKPVVLECV REAEKRLAGS TFMEYLPMGG
101: SAKMVDLTLK LAYGDNSEFI KDKRIAAVQT LSGTGACRLF ADFQKRFSPG SQIYIPVPTW SNHHNIWKDA QVPQKTYHYY HPETKGLDFS ALMDDVKNAP
201: EGSFFLLHAC AHNPTGVDPT EEQWREISQL FKAKKHFAFF DMAYQGFASG DPARDAKSIR IFLEDGHHIG ISQSYAKNMG LYGQRVGCLS VLCEDPKQAV
301: AVKSQLQQLA RPMYSNPPLH GAQLVSTILE DPELKSLWLK EVKVMADRII GMRTTLRESL EKLGSPLSWE HVTKQIGMFC YSGLTPEQVD RLTSEYHIYM
401: TRNGRISMAG VTTGNVGYLA NAIHEVTKSS

Arabidopsis Description

ASP1Aspartate aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46643]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.