Factsheet for TraesCS6A01G018600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G026900.1	Wheat	mitochondrion	98.83	98.83
TraesCS6D01G022800.1	Wheat	mitochondrion	93.66	92.58
Os02t0236000-01	Rice	mitochondrion	91.31	90.05
TraesCS7A01G353500.1	Wheat	mitochondrion	88.73	88.73
Zm00001d016198_P003	Maize	mitochondrion	88.5	87.67
KXG29888	Sorghum	mitochondrion	88.26	87.44
GSMUA_Achr6P14650_001	Banana	mitochondrion	87.56	86.95
HORVU6Hr1G003470.2	Barley	plastid	95.77	85.36
VIT_12s0028g01820.t01	Wine grape	mitochondrion	82.39	82.98
PGSC0003DMT400052597	Potato	mitochondrion	82.39	82.59
Solyc07g055210.2.1	Tomato	extracellular, mitochondrion, plastid	81.22	81.41
Bra021682.1-P	Field mustard	mitochondrion	80.75	80.75
CDY58981	Canola	mitochondrion	80.52	80.33
CDX97776	Canola	mitochondrion	80.75	80.19
AT2G30970.1	Thale cress	mitochondrion	79.11	78.37
CDY10765	Canola	mitochondrion	77.93	78.3
Bra018286.1-P	Field mustard	mitochondrion	77.7	78.07
KRH55720	Soybean	mitochondrion	77.93	77.75
CDY52691	Canola	mitochondrion	71.83	75.37
TraesCS3A01G305400.1	Wheat	cytosol, peroxisome	45.77	50.39
TraesCS6A01G360700.2	Wheat	golgi, plastid, unclear	45.07	41.03

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	InterPro:Asp_trans	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS
PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879	PANTHER:PTHR11879:SF18	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	EnsemblPlantsGene:TraesCS6A01G018600	EnsemblPlants:TraesCS6A01G018600.1	TIGR:cd00609
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:9049257..9053017

Molecular Weight (calculated)

47330.7 Da

IEP (calculated)

6.987

GRAVY (calculated)

-0.275

Length

426 amino acids

Sequence
(BLAST)

001: MALYRRAASA IRRRGAGGLP LLPARAMASL FGHVEPAPKD PILGVTEAFL ADPSPDKVNV GVGAYRDDSG KPVVLDCVRE AERRIAGNLN MEYLPMGGSI
101: HMIEESLKLA YGEDSEFIKD KRIAAVQALS GTGACRLFAD FQKRFLPDSQ IYIPTPTWSN HHNIWRDAQV PQRTFSYYHP ESRGLDFAGL MDDIKNAPNG
201: SFFLLHACAH NPTGVDPTEE QWREISYQFK LKNHFPFFDM AYQGFASGDP ERDAKAIRIF LEDGHQIGCA QSYAKNMGLY GQRAGCLSIL CEDEMQAVAV
301: KSQLQQIARP MYSNPPVHGA LVVSIILSDP ELKNVWLGEV KGMADRIIGM RKALRENLEK LGSPLSWEHV TNQIGMFCYS GMTPEQVDRL TSEYHIYMTR
401: NGRISMAGVT TGNVAYLANA IHDVTK

Best Arabidopsis Sequence Match ( AT2G30970.2 )
(BLAST)

001: MALAMMIRNA ASKRGMTPIS GHFGGLRSMS SWWKSVEPAP KDPILGVTEA FLADPSPEKV NVGVGAYRDD NGKPVVLECV REAEKRLAGS TFMEYLPMGG
101: SAKMVDLTLK LAYGDNSEFI KDKRIAAVQT LSGTGACRLF ADFQKRFSPG SQIYIPVPTW SNHHNIWKDA QVPQKTYHYY HPETKGLDFS ALMDDVKNAP
201: EGSFFLLHAC AHNPTGVDPT EEQWREISQL FKAKKHFAFF DMAYQGFASG DPARDAKSIR IFLEDGHHIG ISQSYAKNMG LYGQRVGCLS VLCEDPKQAV
301: AVKSQLQQLA RPMYSNPPLH GAQLVSTILE DPELKSLWLK EVKVMADRII GMRTTLRESL EKLGSPLSWE HVTKQIGMFC YSGLTPEQVD RLTSEYHIYM
401: TRNGRISMAG VTTGNVGYLA NAIHEVTKSS

Arabidopsis Description

ASP1Aspartate aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46643]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.