CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021682.1-P	Field mustard	mitochondrion	98.6	99.3
CDY58981	Canola	mitochondrion	98.37	98.83
CDY10765	Canola	mitochondrion	92.54	93.63
AT2G30970.1	Thale cress	mitochondrion	89.74	89.53
CDY52691	Canola	mitochondrion	80.65	85.22
VIT_12s0028g01820.t01	Wine grape	mitochondrion	83.92	85.11
Solyc07g055210.2.1	Tomato	extracellular, mitochondrion, plastid	82.52	83.29
PGSC0003DMT400052597	Potato	mitochondrion	82.05	82.82
TraesCS7D01G369300.1	Wheat	mitochondrion	81.82	82.39
TraesCS7A01G353500.1	Wheat	mitochondrion	81.82	82.39
TraesCS7B01G274100.1	Wheat	mitochondrion	81.35	81.92
TraesCS6B01G026900.1	Wheat	mitochondrion	80.65	81.22
GSMUA_Achr6P14650_001	Banana	mitochondrion	81.12	81.12
TraesCS6A01G018600.1	Wheat	golgi, mitochondrion	80.19	80.75
TraesCS6D01G022800.1	Wheat	mitochondrion	79.95	79.58
KXG29888	Sorghum	mitochondrion	79.72	79.53
Zm00001d016198_P003	Maize	mitochondrion	79.72	79.53
Os02t0236000-01	Rice	mitochondrion	79.95	79.4
KRH55720	Soybean	mitochondrion	77.62	77.99
Os06t0548000-01	Rice	mitochondrion	80.65	74.73
HORVU6Hr1G003470.2	Barley	plastid	80.42	72.18
HORVU7Hr1G089290.4	Barley	cytosol	80.89	65.72
CDX92520	Canola	cytosol	47.79	50.62
CDY71396	Canola	cytosol	28.21	50.42
CDY65959	Canola	cytosol	47.55	50.37
CDY44925	Canola	cytosol	47.09	49.88
CDY42276	Canola	cytosol	47.09	49.88
HORVU2Hr1G033320.4	Barley	cytosol	8.39	49.32
CDX70399	Canola	plastid	48.72	46.44
CDX78428	Canola	plastid	48.72	46.24
CDY39814	Canola	cytosol	42.19	44.69
CDY31847	Canola	cytosol	41.03	43.46
CDY46924	Canola	cytosol	41.03	43.46
CDY32206	Canola	cytosol	40.56	42.96
CDY20276	Canola	cytosol	40.09	42.47
CDX91212	Canola	plastid	29.84	41.69
CDY13467	Canola	plastid	43.82	41.41
CDX72339	Canola	plastid	43.82	40.78
CDY34689	Canola	endoplasmic reticulum, vacuole	39.86	39.04
CDX68807	Canola	plastid	43.82	36.65
CDX72238	Canola	mitochondrion	17.72	36.19
CDY25702	Canola	vacuole	8.86	26.21

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	GO:A0A078E984	InterPro:Aminotransferase_I/II	InterPro:Asp_trans	EnsemblPlants:CDX97776
ProteinID:CDX97776	ProteinID:CDX97776.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004069	GO:GO:0005488
GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	GO:GO:0030170	GO:GO:0080130	EnsemblPlantsGene:GSBRNA2T00105056001	InterPro:IPR015421	InterPro:IPR015422
InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879	PANTHER:PTHR11879:SF18
MetaCyc:PWY-5913	MetaCyc:PWY-6318	MetaCyc:PWY-6638	MetaCyc:PWY-6642	MetaCyc:PWY-6643	MetaCyc:PWY-7115
MetaCyc:PWY-7117	MetaCyc:PWY-7383	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
UniParc:UPI0004EAD840	:	:	:	:	:

Description

BnaC04g41630D

Coordinates

chrLK031901:-:274212..277217

Molecular Weight (calculated)

47805.3 Da

IEP (calculated)

8.348

GRAVY (calculated)

-0.341

Length

429 amino acids

Sequence
(BLAST)

001: MAMMATAIRN SASRGTMMSR QISGLRSMSS WWKNVEPAPK DPILGVTEAF LADPSPDKVN VGVGAYRDDN GKPVVLECVR EAERRIAGTS FMEYLPMGGS
101: VKMVDETLKL AYGDNSEFIK DKRIAAVQSL SGTGACRLFA DFQKRFRPDS QIYIPVPTWS NHHNIWRDAQ VTQKTYHYYH PETKGLDFSG LMDDVKNAPQ
201: GSFFLLHACA HNPTGVDPTE EQWREISQLF KAKNHFAFFD MAYQGFASGD PARDAKSIRI FLEDGHHIGI SQSYAKNMGL YGQRVGCLSV LCEDEKQAVT
301: VKSQLQQLAR PMYSNPPLHG AQIVSTILGD PALKGLWLKE VKVMADRIIG MRTALRESLE KLGSPLSWEH VTKQIGMFCY SGMTPEQVDR LTSEYHIYMT
401: RNGRISMAGV TTGNVGYLAN AIHEVTKSS

Best Arabidopsis Sequence Match ( AT2G30970.2 )
(BLAST)

001: MALAMMIRNA ASKRGMTPIS GHFGGLRSMS SWWKSVEPAP KDPILGVTEA FLADPSPEKV NVGVGAYRDD NGKPVVLECV REAEKRLAGS TFMEYLPMGG
101: SAKMVDLTLK LAYGDNSEFI KDKRIAAVQT LSGTGACRLF ADFQKRFSPG SQIYIPVPTW SNHHNIWKDA QVPQKTYHYY HPETKGLDFS ALMDDVKNAP
201: EGSFFLLHAC AHNPTGVDPT EEQWREISQL FKAKKHFAFF DMAYQGFASG DPARDAKSIR IFLEDGHHIG ISQSYAKNMG LYGQRVGCLS VLCEDPKQAV
301: AVKSQLQQLA RPMYSNPPLH GAQLVSTILE DPELKSLWLK EVKVMADRII GMRTTLRESL EKLGSPLSWE HVTKQIGMFC YSGLTPEQVD RLTSEYHIYM
401: TRNGRISMAG VTTGNVGYLA NAIHEVTKSS

Arabidopsis Description

ASP1Aspartate aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46643]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.