Factsheet for Os02t0236000-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

plastid: 17189339
mitochondrion: 19010998
mitochondrion: 23027867
mitochondrion: 23356873
plastid: 27992503

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 23356873 doi

S Huang, RP Jacoby, RN Shingaki-Wells, L Li, AH Millar

ARC Centre of Excellence in Plant Energy Biology and Centre for Comparative Analysis of Biomolecular Networks (CABiN), The University of Western Australia, Bayliss Building M316, 35 Stirling Highway, Crawley, WA, 6009, Australia.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G018600.1	Wheat	golgi, mitochondrion	90.05	91.31
TraesCS6B01G026900.1	Wheat	mitochondrion	89.81	91.08
KXG29888	Sorghum	mitochondrion	89.58	90.0
TraesCS6D01G022800.1	Wheat	mitochondrion	88.66	88.86
Zm00001d016198_P003	Maize	mitochondrion	88.43	88.84
GSMUA_Achr6P14650_001	Banana	mitochondrion	86.57	87.18
VIT_12s0028g01820.t01	Wine grape	mitochondrion	81.25	82.98
Os06t0548000-01	Rice	mitochondrion	87.96	82.07
PGSC0003DMT400052597	Potato	mitochondrion	80.32	81.65
Solyc07g055210.2.1	Tomato	extracellular, mitochondrion, plastid	79.86	81.18
HORVU6Hr1G003470.2	Barley	plastid	89.12	80.54
Bra021682.1-P	Field mustard	mitochondrion	79.4	80.52
CDX97776	Canola	mitochondrion	79.4	79.95
CDY58981	Canola	mitochondrion	78.94	79.86
KRH55720	Soybean	mitochondrion	77.55	78.45
CDY10765	Canola	mitochondrion	76.39	77.83
AT2G30970.1	Thale cress	mitochondrion	77.31	77.67
Bra018286.1-P	Field mustard	mitochondrion	76.16	77.59
CDY52691	Canola	mitochondrion	71.3	75.86
Os01t0760600-01	Rice	plastid	48.15	45.22
Os02t0797500-01	Rice	plastid	44.44	41.92

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	EntrezGene:4328828	EMBL:AK070560	InterPro:Aminotransferase_I/II	InterPro:Asp_trans
ProteinID:BAD27593.1	ProteinID:BAF08302.1	ProteinID:BAS77820.1	ProteinID:EEE56628.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004069	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS
EnsemblPlantsGene:Os02g0236000	EnsemblPlants:Os02t0236000-01	PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879
PANTHER:PTHR11879:SF18	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	UniProt:Q6EUS6	SUPFAM:SSF53383
UniParc:UPI00003CE460	RefSeq:XP_015626225.1	SEG:seg	:	:	:

Description

Similar to Aspartate aminotransferase (EC 2.6.1.1) (Fragment). (Os02t0236000-01)

Coordinates

chr2:+:7706619..7710902

Molecular Weight (calculated)

48110.6 Da

IEP (calculated)

8.080

GRAVY (calculated)

-0.328

Length

432 amino acids

Sequence
(BLAST)

001: MAMSSSRSAA AIRGRRVGAL ARARRHATRA MASLFGHVEP ASKDPILGVT EAFLADPSPD KVNVGVGAYR DDNGKPVVLE CVREAERRIA GNLNMEYLPM
101: GGSIKMIEES LKLAYGEDSD FIKDKRIAAV QALSGTGACR LFADFQRRFL PNSQIYIPTP TWSNHHNIWR DAQVPQRTFT YYHPESRGLD FAGLMDDIKN
201: APNGSFFLLH ACAHNPTGVD PTEEQWREIS YQFKIKNHFP FFDMAYQGFA SGDPERDAKA IRIFLEDGHQ IGCAQSYAKN MGLYGQRAGC LSILCEDEMQ
301: AVSVKSQLQQ IARPMYSNPP VHGALVVSII LNDPELKSLW LKEVKGMADR IIGMRKALRE NLEGLGSPLS WDHITNQIGM FCYSGMTPEQ VDRLTNEYHI
401: YMTRNGRISM AGVTTGNVAY LANAIHEVTK TK

Best Arabidopsis Sequence Match ( AT2G30970.2 )
(BLAST)

001: MALAMMIRNA ASKRGMTPIS GHFGGLRSMS SWWKSVEPAP KDPILGVTEA FLADPSPEKV NVGVGAYRDD NGKPVVLECV REAEKRLAGS TFMEYLPMGG
101: SAKMVDLTLK LAYGDNSEFI KDKRIAAVQT LSGTGACRLF ADFQKRFSPG SQIYIPVPTW SNHHNIWKDA QVPQKTYHYY HPETKGLDFS ALMDDVKNAP
201: EGSFFLLHAC AHNPTGVDPT EEQWREISQL FKAKKHFAFF DMAYQGFASG DPARDAKSIR IFLEDGHHIG ISQSYAKNMG LYGQRVGCLS VLCEDPKQAV
301: AVKSQLQQLA RPMYSNPPLH GAQLVSTILE DPELKSLWLK EVKVMADRII GMRTTLRESL EKLGSPLSWE HVTKQIGMFC YSGLTPEQVD RLTSEYHIYM
401: TRNGRISMAG VTTGNVGYLA NAIHEVTKSS

Arabidopsis Description

ASP1Aspartate aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46643]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.