Factsheet for TraesCS6B01G026900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

mitochondrion: 21043471
mitochondrion: 23895732

msms PMID: 21043471 doi

RP Jacoby, AH Millar, NL Taylor

ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks, M316, The University of Western Australia, 35 Stirling Highway, Crawley,WA 6009, Australia.

msms PMID: 23895732 doi

RP Jacoby, AH Millar, NL Taylor

ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks (CABiN), M316, The University of Western Australia , 35 Stirling Highway, Crawley, WA 6009, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G018600.1	Wheat	golgi, mitochondrion	98.83	98.83
TraesCS6D01G022800.1	Wheat	mitochondrion	93.43	92.34
Os02t0236000-01	Rice	mitochondrion	91.08	89.81
TraesCS7B01G274100.1	Wheat	mitochondrion	88.5	88.5
Zm00001d016198_P003	Maize	mitochondrion	88.97	88.14
KXG29888	Sorghum	mitochondrion	88.5	87.67
GSMUA_Achr6P14650_001	Banana	mitochondrion	87.79	87.18
HORVU6Hr1G003470.2	Barley	plastid	95.54	85.15
VIT_12s0028g01820.t01	Wine grape	mitochondrion	82.86	83.45
PGSC0003DMT400052597	Potato	mitochondrion	82.86	83.06
Solyc07g055210.2.1	Tomato	extracellular, mitochondrion, plastid	81.69	81.88
Bra021682.1-P	Field mustard	mitochondrion	81.22	81.22
CDY58981	Canola	mitochondrion	80.99	80.8
CDX97776	Canola	mitochondrion	81.22	80.65
AT2G30970.1	Thale cress	mitochondrion	79.58	78.84
CDY10765	Canola	mitochondrion	78.4	78.77
Bra018286.1-P	Field mustard	mitochondrion	78.17	78.54
KRH55720	Soybean	mitochondrion	77.7	77.52
CDY52691	Canola	mitochondrion	72.07	75.62
TraesCS3B01G331100.1	Wheat	golgi	48.83	45.81
TraesCS6B01G393600.1	Wheat	golgi	45.54	42.64

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	InterPro:Asp_trans	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS
PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879	PANTHER:PTHR11879:SF18	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	EnsemblPlantsGene:TraesCS6B01G026900	EnsemblPlants:TraesCS6B01G026900.1	TIGR:cd00609

Description

No Description!

Coordinates

chr6B:-:15929779..15933723

Molecular Weight (calculated)

47434.8 Da

IEP (calculated)

6.836

GRAVY (calculated)

-0.293

Length

426 amino acids

Sequence
(BLAST)

001: MALYRRAASA IRQRGALPLL PARAMASLFG HVEPAPKDPI LGVTEAFLAD PSPDKVNVGV GAYRDDNGKP VVLDCVREAE RRIAGNLNME YLPMGGSMHM
101: IEESLKLAYG EDSEFIKDKR IAAVQALSGT GACRLFADFQ KRFLPDSQIY IPTPTWSNHH NIWRDAQVPQ RTFSYYHPES RGLDFAGLMD DIKNAPNGSF
201: FLLHACAHNP TGVDPTEEQW REISYQFKLK NHFPFFDMAY QGFASGDPER DAKAIRIFLE DGHQIGCAQS YAKNMGLYGQ RAGCLSILCE DEMQAVAVKS
301: QLQQIARPMY SNPPVHGALV VSIILSDPEL KNVWLGEVKG MADRIIGMRK ALRENLEKLG SPLSWEHVTN QIGMFCYSGM TPEQVDRLTS EYHIYMTRNG
401: RISMAGVTTG NVAYLANAIH DVTKSN

Best Arabidopsis Sequence Match ( AT2G30970.2 )
(BLAST)

001: MALAMMIRNA ASKRGMTPIS GHFGGLRSMS SWWKSVEPAP KDPILGVTEA FLADPSPEKV NVGVGAYRDD NGKPVVLECV REAEKRLAGS TFMEYLPMGG
101: SAKMVDLTLK LAYGDNSEFI KDKRIAAVQT LSGTGACRLF ADFQKRFSPG SQIYIPVPTW SNHHNIWKDA QVPQKTYHYY HPETKGLDFS ALMDDVKNAP
201: EGSFFLLHAC AHNPTGVDPT EEQWREISQL FKAKKHFAFF DMAYQGFASG DPARDAKSIR IFLEDGHHIG ISQSYAKNMG LYGQRVGCLS VLCEDPKQAV
301: AVKSQLQQLA RPMYSNPPLH GAQLVSTILE DPELKSLWLK EVKVMADRII GMRTTLRESL EKLGSPLSWE HVTKQIGMFC YSGLTPEQVD RLTSEYHIYM
401: TRNGRISMAG VTTGNVGYLA NAIHEVTKSS

Arabidopsis Description

ASP1Aspartate aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46643]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.