Factsheet for TraesCS6B01G393600.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G344200.1	Wheat	plastid	97.58	97.37
TraesCS6A01G360700.2	Wheat	golgi, plastid, unclear	90.33	87.82
KXG31276	Sorghum	plastid	87.69	86.93
Os02t0797500-01	Rice	plastid	86.59	86.03
Zm00001d018386_P005	Maize	plastid	86.81	84.04
HORVU0Hr1G017370.1	Barley	plastid	95.38	83.46
KRH05255	Soybean	plastid	78.46	77.11
KRH15792	Soybean	plastid	78.46	77.11
GSMUA_Achr6P30270_001	Banana	plastid	77.36	76.69
Bra023969.1-P	Field mustard	plastid	75.82	76.16
CDY13467	Canola	plastid	75.82	75.99
PGSC0003DMT400076866	Potato	cytosol, plastid	76.26	75.11
AT4G31990.3	Thale cress	plastid	76.04	74.89
CDX72339	Canola	plastid	75.6	74.62
Solyc08g041870.2.1	Tomato	plastid	75.16	74.03
VIT_04s0008g06040.t01	Wine grape	cytosol, peroxisome, plastid	77.14	67.5
CDX68807	Canola	plastid	75.82	67.25
CDX72238	Canola	mitochondrion	27.25	59.05
TraesCS3B01G331100.1	Wheat	golgi	48.35	48.46
TraesCS7B01G274100.1	Wheat	mitochondrion	44.18	47.18
TraesCS6B01G026900.1	Wheat	mitochondrion	42.64	45.54

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	InterPro:Asp_trans	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422
InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879	PANTHER:PTHR11879:SF1
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	EnsemblPlantsGene:TraesCS6B01G393600	EnsemblPlants:TraesCS6B01G393600.1
TIGR:cd00609	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:668433204..668437268

Molecular Weight (calculated)

49788.6 Da

IEP (calculated)

7.561

GRAVY (calculated)

-0.220

Length

455 amino acids

Sequence
(BLAST)

001: MASALSAPAA SAVAAARCKV FGGGRNDGRA GCRVGVARKN TGHITMALAV DASRFEGVPM APPDPILGVS EAFKADTSDL KLNLGVGAYR TEELQPAVLN
101: VVKKAEKLML EKGENKEYLP IEGFAAFNKA TADLLLGADN PVIKQGRVAT LQSLSGTGSL RLAAAFIQRY FPDSKVLISS PTWGNHKNIF NDARVPWSEY
201: RYYDPKTVGL DFEGMIADIQ AAPEGSFVLL HGCAHNPTGI DPTPEQWEKL ADVIEEKKHM PFFDVAYQGF ASGSLDEDAS SVRLFVKRGL EVFVAQSYSK
301: NLGLYAERIG AINVICSAPE VADRVKSQLK RLARPMYSNP PIHGAKIVAN VVGDPTMFGE WKEEMEQMAG RIKNVRQKLY DSLTEKDQSG KDWSFILRQI
401: GMFSFTGLNR PQSDNMTDKW HIYMTKDGRI SLAGLNLAKC EYLADAIIDS FHNVN

Best Arabidopsis Sequence Match ( AT4G31990.1 )
(BLAST)

001: MASLMLSLGS TSLLPREINK DKLKLGTSAS NPFLKAKSFS RVTMTVAVKP SRFEGITMAP PDPILGVSEA FKADTNGMKL NLGVGAYRTE ELQPYVLNVV
101: KKAENLMLER GDNKEYLPIE GLAAFNKATA ELLFGAGHPV IKEQRVATIQ GLSGTGSLRL AAALIERYFP GAKVVISSPT WGNHKNIFND AKVPWSEYRY
201: YDPKTIGLDF EGMIADIKEA PEGSFILLHG CAHNPTGIDP TPEQWVKIAD VIQEKNHIPF FDVAYQGFAS GSLDEDAASV RLFAERGMEF FVAQSYSKNL
301: GLYAERIGAI NVVCSSADAA TRVKSQLKRI ARPMYSNPPV HGARIVANVV GDVTMFSEWK AEMEMMAGRI KTVRQELYDS LVSKDKSGKD WSFILKQIGM
401: FSFTGLNKAQ SDNMTDKWHV YMTKDGRISL AGLSLAKCEY LADAIIDSYH NVS

Arabidopsis Description

ASP5Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:B9DG21]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.