Factsheet for TraesCS3B01G331100.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plastid

golgi: 23128297
golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G305400.1	Wheat	cytosol, peroxisome	83.92	98.45
Os01t0760600-01	Rice	plastid	92.51	91.3
HORVU3Hr1G073220.8	Barley	mitochondrion, plastid	97.58	90.78
KXG33419	Sorghum	plastid	88.11	87.15
PGSC0003DMT400040385	Potato	cytosol	75.99	84.98
Zm00001d043382_P001	Maize	plasma membrane	85.9	84.97
GSMUA_Achr4P08110_001	Banana	cytosol	77.97	84.09
Solyc07g032740.2.1	Tomato	plastid, unclear	66.08	84.03
VIT_11s0016g03720.t01	Wine grape	cytosol	75.55	83.45
GSMUA_Achr7P25170_001	Banana	cytosol, peroxisome, plastid	76.87	82.31
KRH62024	Soybean	nucleus	74.67	81.49
VIT_04s0008g03770.t01	Wine grape	cytosol	74.67	80.33
PGSC0003DMT400028106	Potato	plastid	79.07	79.25
Solyc08g068330.2.1	Tomato	plastid	78.85	79.2
KRH52682	Soybean	endoplasmic reticulum	78.85	78.51
CDX70399	Canola	plastid	75.77	76.44
CDX78428	Canola	plastid	75.55	75.89
Bra006103.1-P	Field mustard	plastid	75.55	75.89
AT5G11520.1	Thale cress	plastid	74.89	75.72
CDX91212	Canola	plastid	45.37	67.1
TraesCS6B01G026900.1	Wheat	mitochondrion	45.81	48.83
TraesCS6B01G393600.1	Wheat	golgi	48.46	48.35
TraesCS7B01G274100.1	Wheat	mitochondrion	44.71	47.65

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	InterPro:Asp_trans	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777
GO:GO:0006520	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058
GO:GO:0009536	GO:GO:0009987	GO:GO:0010150	GO:GO:0016020	GO:GO:0016740	GO:GO:0030170
InterPro:IPR015421	InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105
PANTHER:PTHR11879	PANTHER:PTHR11879:SF33	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
EnsemblPlantsGene:TraesCS3B01G331100	EnsemblPlants:TraesCS3B01G331100.1	TIGR:cd00609	SEG:seg	:	:

Description

No Description!

Coordinates

chr3B:-:536075384..536079282

Molecular Weight (calculated)

49521.6 Da

IEP (calculated)

8.425

GRAVY (calculated)

-0.090

Length

454 amino acids

Sequence
(BLAST)

001: MPTANVRAAQ PSADRRLSTL VRHLLPSSPR TSAATATSAD SLQPFPTMAS PSVFAGIAQG PEDPILGVTV AYNKDPSPVK VNLGVGAYRT EEGKPLVLNV
101: VKRAEQMLIH NESRVKEYLP ITGLADFNKL SAKLIFGADS PAIQENRVAT VQCLSGTGSL RVGGEFLARH YHERTIYIPQ PTWGNHPKVF TLAGLTARSY
201: RYYDPATRGL DFQGLLEDLS SAPSGAIVLL HACAHNPTGV DPTLEQWEQI RQLMRSKALL PFFDSAYQGF ASGSLDKDAQ SVRMFVADGG ELLMAQSYAK
301: NMGLYGERVG ALSIVCGSAD IAVKVESQLK LVIRPMYSNP PLHGASIVAT ILKDSAMFDE WTVELKAMAD RIISMREQLF DALKIRETPG DWSHIIKQIG
401: MFTFTGLNSE QVAFMRQEYH IYMTSDGRIS MAGLSSRTVP HLADAIHAAV TKLK

Best Arabidopsis Sequence Match ( AT5G11520.1 )
(BLAST)

001: MKTTHFSSSS SSDRRIGALL RHLNSGSDSD NLSSLYASPT SGGTGGSVFS HLVQAPEDPI LGVTVAYNKD PSPVKLNLGV GAYRTEEGKP LVLNVVRKAE
101: QQLINDRTRI KEYLPIVGLV EFNKLSAKLI LGADSPAIRE NRITTVECLS GTGSLRVGGE FLAKHYHQKT IYITQPTWGN HPKIFTLAGL TVKTYRYYDP
201: ATRGLNFQGL LEDLGAAAPG SIVLLHACAH NPTGVDPTIQ QWEQIRKLMR SKGLMPFFDS AYQGFASGSL DTDAKPIRMF VADGGECLVA QSYAKNMGLY
301: GERVGALSIV CKSADVAGRV ESQLKLVIRP MYSSPPIHGA SIVAVILRDK NLFNEWTLEL KAMADRIISM RKQLFEALRT RGTPGDWSHI IKQIGMFTFT
401: GLNPAQVSFM TKEYHIYMTS DGRISMAGLS SKTVPHLADA IHAVVTKAV

Arabidopsis Description

ASP3Aspartate aminotransferase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46644]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.