Factsheet for GSMUA_Achr4P08110_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P25170_001	Banana	cytosol, peroxisome, plastid	92.64	91.98
PGSC0003DMT400040385	Potato	cytosol	85.27	88.42
VIT_11s0016g03720.t01	Wine grape	cytosol	85.75	87.83
TraesCS3A01G305400.1	Wheat	cytosol, peroxisome	80.28	87.34
Solyc07g032740.2.1	Tomato	plastid, unclear	73.87	87.11
VIT_04s0008g03770.t01	Wine grape	cytosol	85.75	85.55
KRH62024	Soybean	nucleus	83.14	84.13
PGSC0003DMT400028106	Potato	plastid	85.51	79.47
Solyc08g068330.2.1	Tomato	plastid	85.27	79.42
KXG33419	Sorghum	plastid	85.99	78.87
CDX70399	Canola	plastid	83.37	78.0
Zm00001d043382_P001	Maize	plasma membrane	85.04	78.0
TraesCS3B01G331100.1	Wheat	golgi	84.09	77.97
CDX78428	Canola	plastid	83.61	77.88
Bra006103.1-P	Field mustard	plastid	83.61	77.88
Os01t0760600-01	Rice	plastid	85.04	77.83
AT5G11520.1	Thale cress	plastid	82.66	77.51
KRH52682	Soybean	endoplasmic reticulum	82.9	76.54
HORVU3Hr1G073220.8	Barley	mitochondrion, plastid	84.09	72.54
CDX91212	Canola	plastid	49.17	67.43
GSMUA_Achr5P16540_001	Banana	cytosol, peroxisome, plastid	32.54	50.93
GSMUA_Achr6P30270_001	Banana	plastid	53.21	48.8
GSMUA_Achr6P14650_001	Banana	mitochondrion	48.69	47.79

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	InterPro:Asp_trans	GO:GO:0003674	GO:GO:0003824
GO:GO:0004069	GO:GO:0005488	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	GO:GO:0080130	EnsemblPlantsGene:GSMUA_Achr4G08110_001
EnsemblPlants:GSMUA_Achr4P08110_001	EnsemblPlants:GSMUA_Achr4T08110_001	InterPro:IPR015421	InterPro:IPR015422	UniProt:M0SM28	InterPro:NHTrfase_class1_PyrdxlP-BS
PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879	PANTHER:PTHR11879:SF33	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI000296F2DB	:	:

Description

Aspartate aminotransferase, cytoplasmic [Source:GMGC_GENE;Acc:GSMUA_Achr4G08110_001]

Coordinates

chr4:-:6020167..6029201

Molecular Weight (calculated)

45993.5 Da

IEP (calculated)

8.543

GRAVY (calculated)

-0.069

Length

421 amino acids

Sequence
(BLAST)

001: MASQNPIAPS PAAGIYGGSV FANVVQAPED PILGVTVAYN KDPSPVKVNL GVGAYRTEEG KPLVLNVVRR AEQLLVNDPS RVKEYLPITG LADFNKLSAK
101: LIFGADSPAI QENRVATVQC LSGTGSLRVG GEFLARHYHE RTIYIPQPTW GNHPKVFTLA GLSVKTYRYY DPTTRGLNFE GLLADLSAAP PGAIVLLHAC
201: AHNPTGVDPT LDQWEQIRLL MRSKGLLPFF DSAYQGFASG NLDADAQSVR MFVADGGECL TAQSYAKNMG LYGERVGALS IVCKSADVAT RVESQLKLVI
301: RPMYSNPPIH GASIVATILK DRELYHEWTI ELKAMADRII NMRQQLFDAL RARGTPGDWS HIIKQIGMFT FTGLNTEQVT FMTKEYHIYM TSDGRISMAG
401: LSSKTVPHLV DAIHAAVTRM K

Best Arabidopsis Sequence Match ( AT5G11520.1 )
(BLAST)

001: MKTTHFSSSS SSDRRIGALL RHLNSGSDSD NLSSLYASPT SGGTGGSVFS HLVQAPEDPI LGVTVAYNKD PSPVKLNLGV GAYRTEEGKP LVLNVVRKAE
101: QQLINDRTRI KEYLPIVGLV EFNKLSAKLI LGADSPAIRE NRITTVECLS GTGSLRVGGE FLAKHYHQKT IYITQPTWGN HPKIFTLAGL TVKTYRYYDP
201: ATRGLNFQGL LEDLGAAAPG SIVLLHACAH NPTGVDPTIQ QWEQIRKLMR SKGLMPFFDS AYQGFASGSL DTDAKPIRMF VADGGECLVA QSYAKNMGLY
301: GERVGALSIV CKSADVAGRV ESQLKLVIRP MYSSPPIHGA SIVAVILRDK NLFNEWTLEL KAMADRIISM RKQLFEALRT RGTPGDWSHI IKQIGMFTFT
401: GLNPAQVSFM TKEYHIYMTS DGRISMAGLS SKTVPHLADA IHAVVTKAV

Arabidopsis Description

ASP3Aspartate aminotransferase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46644]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.