Factsheet for VIT_04s0008g03770.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g03720.t01	Wine grape	cytosol	85.07	87.35
GSMUA_Achr4P08110_001	Banana	cytosol	85.55	85.75
GSMUA_Achr7P25170_001	Banana	cytosol, peroxisome, plastid	84.6	84.2
TraesCS3A01G305400.1	Wheat	cytosol, peroxisome	77.01	83.98
KRH62024	Soybean	nucleus	81.75	82.93
PGSC0003DMT400028106	Potato	plastid	85.07	79.25
Solyc08g068330.2.1	Tomato	plastid	84.6	78.98
CDX70399	Canola	plastid	82.46	77.33
Bra006103.1-P	Field mustard	plastid	82.7	77.21
CDX78428	Canola	plastid	82.7	77.21
AT5G11520.1	Thale cress	plastid	81.99	77.06
KRH52682	Soybean	endoplasmic reticulum	82.23	76.1
KXG33419	Sorghum	plastid	81.99	75.38
Os01t0760600-01	Rice	plastid	81.52	74.78
TraesCS3B01G331100.1	Wheat	golgi	80.33	74.67
Zm00001d043382_P001	Maize	plasma membrane	80.57	74.07
HORVU3Hr1G073220.8	Barley	mitochondrion, plastid	80.33	69.47
CDX91212	Canola	plastid	48.58	66.78
VIT_12s0028g01820.t01	Wine grape	mitochondrion	46.45	46.34
VIT_04s0008g06040.t01	Wine grape	cytosol, peroxisome, plastid	54.27	44.04
VIT_08s0058g01000.t01	Wine grape	mitochondrion	44.08	43.56
VIT_05s0020g03410.t01	Wine grape	cytosol	12.8	24.88

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	EntrezGene:100256163
wikigene:100256163	MapMan:25.1.7	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	InterPro:Asp_trans
ProteinID:CBI20886	ProteinID:CBI20886.3	UniProt:D7SUD7	EMBL:FN595231	GO:GO:0003674	GO:GO:0003824
GO:GO:0004069	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	GO:GO:0006520	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483
GO:GO:0009058	GO:GO:0009536	GO:GO:0009987	GO:GO:0010150	GO:GO:0016020	GO:GO:0016740
GO:GO:0030170	GO:GO:0080130	InterPro:IPR015421	InterPro:IPR015422	EntrezGene:LOC100256163	wikigene:LOC100256163
InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879	PANTHER:PTHR11879:SF33
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	TIGR:TC55957	TIGR:TC59902
UniParc:UPI0001BE1854	ArrayExpress:VIT_04s0008g03770	EnsemblPlantsGene:VIT_04s0008g03770	EnsemblPlants:VIT_04s0008g03770.t01	unigene:Vvi.7464	RefSeq:XP_002284136
RefSeq:XP_002284136.1	:	:	:	:	:

Description

Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:D7SUD7]

Coordinates

chr4:+:3104451..3109265

Molecular Weight (calculated)

46069.6 Da

IEP (calculated)

9.197

GRAVY (calculated)

-0.033

Length

422 amino acids

Sequence
(BLAST)

001: MDPNHTISAS ATSGSDFGGS VFDHVVQAPE DPILGVTVAY NKDPSPVKLN LGVGAYRTEE GKPLVLNVVR RAEQLLVNDR SRVKEYLPIV GLAEFNKLSA
101: KLMFGADSPA IQVKRVTTVQ CLSGTGSLRV GAEFLARHHH QRTIYIPQPT WGNHGKIFTL AGLSVKTYRY YDPATRGLNF QGLLEDLSLA PSGAIVLLHA
201: CAHNPTGVDP TLQQWEQIRQ LIRLKGLLPF FDSAYQGFAS GSLDADAQSV RMFVADGGEC LAAQSYAKNM GLYGERVGAL SIVCKTADVA SRVESQVKLV
301: IRPMFSNPPI HGASIVAIIL KNRDMYNEWT VELKAMADRI ISMRQQLFDA LRARGTPGDW NHILKQIGMF TFTGLNTAQV AFMTKEYHVY MTSDGRISMA
401: GLSSKTVPHL ADAIHAAVTR AI

Best Arabidopsis Sequence Match ( AT5G11520.1 )
(BLAST)

001: MKTTHFSSSS SSDRRIGALL RHLNSGSDSD NLSSLYASPT SGGTGGSVFS HLVQAPEDPI LGVTVAYNKD PSPVKLNLGV GAYRTEEGKP LVLNVVRKAE
101: QQLINDRTRI KEYLPIVGLV EFNKLSAKLI LGADSPAIRE NRITTVECLS GTGSLRVGGE FLAKHYHQKT IYITQPTWGN HPKIFTLAGL TVKTYRYYDP
201: ATRGLNFQGL LEDLGAAAPG SIVLLHACAH NPTGVDPTIQ QWEQIRKLMR SKGLMPFFDS AYQGFASGSL DTDAKPIRMF VADGGECLVA QSYAKNMGLY
301: GERVGALSIV CKSADVAGRV ESQLKLVIRP MYSSPPIHGA SIVAVILRDK NLFNEWTLEL KAMADRIISM RKQLFEALRT RGTPGDWSHI IKQIGMFTFT
401: GLNPAQVSFM TKEYHIYMTS DGRISMAGLS SKTVPHLADA IHAVVTKAV

Arabidopsis Description

ASP3Aspartate aminotransferase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46644]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.