Factsheet for Solyc08g068330.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

plastid: 20363867
plastid: 22908117
extracellular: 29876421

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028106	Potato	plastid	97.35	97.13
GSMUA_Achr4P08110_001	Banana	cytosol	79.42	85.27
TraesCS3A01G305400.1	Wheat	cytosol, peroxisome	73.01	85.27
Solyc07g032740.2.1	Tomato	plastid, unclear	67.04	84.87
VIT_04s0008g03770.t01	Wine grape	cytosol	78.98	84.6
KRH62024	Soybean	nucleus	76.77	83.41
GSMUA_Achr7P25170_001	Banana	cytosol, peroxisome, plastid	77.88	83.02
AT5G11520.1	Thale cress	plastid	79.65	80.18
CDX70399	Canola	plastid	79.42	79.78
Bra006103.1-P	Field mustard	plastid	79.42	79.42
CDX78428	Canola	plastid	79.42	79.42
KRH52682	Soybean	endoplasmic reticulum	79.87	79.17
TraesCS3B01G331100.1	Wheat	golgi	79.2	78.85
KXG33419	Sorghum	plastid	79.65	78.43
Os01t0760600-01	Rice	plastid	79.65	78.26
Zm00001d043382_P001	Maize	plasma membrane	79.42	78.21
HORVU3Hr1G073220.8	Barley	mitochondrion, plastid	79.42	73.57
CDX91212	Canola	plastid	47.57	70.03
Solyc08g041870.2.1	Tomato	plastid	48.89	47.84
Solyc07g055210.2.1	Tomato	extracellular, mitochondrion, plastid	44.03	46.82
Solyc10g075170.1.1	Tomato	mitochondrion	32.08	39.4

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	InterPro:Asp_trans	GO:GO:0003674	GO:GO:0003824
GO:GO:0004069	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	GO:GO:0006520	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483
GO:GO:0009058	GO:GO:0009536	GO:GO:0009987	GO:GO:0010150	GO:GO:0016020	GO:GO:0016740
GO:GO:0030170	GO:GO:0080130	InterPro:IPR015421	InterPro:IPR015422	UniProt:K4CM57	InterPro:NHTrfase_class1_PyrdxlP-BS
PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879	PANTHER:PTHR11879:SF33	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	EnsemblPlantsGene:Solyc08g068330.2	EnsemblPlants:Solyc08g068330.2.1	UniParc:UPI0001D6AEEC

Description

Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:K4CM57]

Coordinates

chr8:-:57428127..57436252

Molecular Weight (calculated)

49686.7 Da

IEP (calculated)

9.656

GRAVY (calculated)

-0.217

Length

452 amino acids

Sequence
(BLAST)

001: MHTQQSPSPS ADRRLSVLAR HLEPSSVAVE GHSNHSIVGA PTSGNDGKQS VFSHIVRAPE DPILGVTVAY NKDTSPMKLN LGVGAYRTEE GKPLVLNVVR
101: QAEQLLVNDR SRIKEYLPIT GLADFNKLSA KLILGADSPA IQENRVTTVQ CLSGTGSLRV GGEFLAQHYH QRTIYIPQPT WGNHTKIFAL AGLSVKSYRY
201: YDPATRGLHF QGLLEDLGSA PSGAIVLLHA CAHNPTGVDP TKDQWEQIRR LMRSKGLLPF FDSAYQGFAS GSLDTDAQSV RMFVADGGEV LVAQSYAKNM
301: GLYGERVGAL SIVCRNADVT SRVESQLKLV IRPMYSNPPI HGASIVATIL KDRNLYHEWT LELKAMADRI IRMRQQLFDA LRAKGTPGDW SHIIKQIGMF
401: TFTGLNKEQV AFMTKEYHIY MTSDGRISMA GLSSRTVPHL TDAIHAAVTR AR

Best Arabidopsis Sequence Match ( AT5G11520.1 )
(BLAST)

001: MKTTHFSSSS SSDRRIGALL RHLNSGSDSD NLSSLYASPT SGGTGGSVFS HLVQAPEDPI LGVTVAYNKD PSPVKLNLGV GAYRTEEGKP LVLNVVRKAE
101: QQLINDRTRI KEYLPIVGLV EFNKLSAKLI LGADSPAIRE NRITTVECLS GTGSLRVGGE FLAKHYHQKT IYITQPTWGN HPKIFTLAGL TVKTYRYYDP
201: ATRGLNFQGL LEDLGAAAPG SIVLLHACAH NPTGVDPTIQ QWEQIRKLMR SKGLMPFFDS AYQGFASGSL DTDAKPIRMF VADGGECLVA QSYAKNMGLY
301: GERVGALSIV CKSADVAGRV ESQLKLVIRP MYSSPPIHGA SIVAVILRDK NLFNEWTLEL KAMADRIISM RKQLFEALRT RGTPGDWSHI IKQIGMFTFT
401: GLNPAQVSFM TKEYHIYMTS DGRISMAGLS SKTVPHLADA IHAVVTKAV

Arabidopsis Description

ASP3Aspartate aminotransferase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46644]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.