Factsheet for TraesCS3A01G305400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G331100.1	Wheat	golgi	98.45	83.92
PGSC0003DMT400040385	Potato	cytosol	85.53	81.53
Solyc07g032740.2.1	Tomato	plastid, unclear	74.42	80.67
VIT_11s0016g03720.t01	Wine grape	cytosol	85.53	80.54
GSMUA_Achr4P08110_001	Banana	cytosol	87.34	80.28
Os01t0760600-01	Rice	plastid	95.35	80.22
KXG33419	Sorghum	plastid	94.06	79.3
GSMUA_Achr7P25170_001	Banana	cytosol, peroxisome, plastid	86.05	78.54
Zm00001d043382_P001	Maize	plasma membrane	92.76	78.21
KRH62024	Soybean	nucleus	83.98	78.12
HORVU3Hr1G073220.8	Barley	mitochondrion, plastid	98.19	77.87
VIT_04s0008g03770.t01	Wine grape	cytosol	83.98	77.01
PGSC0003DMT400028106	Potato	plastid	85.53	73.07
Solyc08g068330.2.1	Tomato	plastid	85.27	73.01
KRH52682	Soybean	endoplasmic reticulum	84.5	71.71
CDX70399	Canola	plastid	82.95	71.33
CDX78428	Canola	plastid	83.2	71.24
Bra006103.1-P	Field mustard	plastid	83.2	71.24
AT5G11520.1	Thale cress	plastid	82.43	71.05
CDX91212	Canola	plastid	47.55	59.93
TraesCS7A01G353500.1	Wheat	mitochondrion	50.9	46.24
TraesCS6A01G018600.1	Wheat	golgi, mitochondrion	50.39	45.77
TraesCS6A01G360700.2	Wheat	golgi, plastid, unclear	52.97	43.8

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	InterPro:Asp_trans	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777
GO:GO:0006520	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058
GO:GO:0009536	GO:GO:0009987	GO:GO:0010150	GO:GO:0016020	GO:GO:0016740	GO:GO:0030170
InterPro:IPR015421	InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105
PANTHER:PTHR11879	PANTHER:PTHR11879:SF33	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
EnsemblPlantsGene:TraesCS3A01G305400	EnsemblPlants:TraesCS3A01G305400.1	TIGR:cd00609	:	:	:

Description

No Description!

Coordinates

chr3A:+:541257235..541260780

Molecular Weight (calculated)

42671.5 Da

IEP (calculated)

8.419

GRAVY (calculated)

-0.089

Length

387 amino acids

Sequence
(BLAST)

001: VTVAYNKDPS PVKVNLGVGA YRTEEGKPLV LNVVRRAEQM LIQNESRVKE YLPITGLADF NKLSAKLIFG ADSPAIQENR VATVQCLSGT GSLRVGGEFL
101: ARHYHERTIY IPQPTWGNHP KVFTLAGLTA RSYRYYDPAT RGLDFQGLLE DISSAPSGAI VLLHACAHNP TGVDPTLEQW EQIRQLMRSK ALLPFFDSAY
201: QGFASGSLDK DAQSVRMFVA DGGELLMAQS YAKNMGLYGE RVGALSIVCG SADIAVKVES QLKLVIRPMY SNPPLHGASI VATILKDSAM FDEWTLELKA
301: MADRIISMRE QLFNALKIRE TPGDWSHIIK QIGMFTFTGL NSDQVAFMRQ EYHIYMTSDG RISMAGLSSR TVPHLADAIH AAVTKLK

Best Arabidopsis Sequence Match ( AT5G11520.1 )
(BLAST)

001: MKTTHFSSSS SSDRRIGALL RHLNSGSDSD NLSSLYASPT SGGTGGSVFS HLVQAPEDPI LGVTVAYNKD PSPVKLNLGV GAYRTEEGKP LVLNVVRKAE
101: QQLINDRTRI KEYLPIVGLV EFNKLSAKLI LGADSPAIRE NRITTVECLS GTGSLRVGGE FLAKHYHQKT IYITQPTWGN HPKIFTLAGL TVKTYRYYDP
201: ATRGLNFQGL LEDLGAAAPG SIVLLHACAH NPTGVDPTIQ QWEQIRKLMR SKGLMPFFDS AYQGFASGSL DTDAKPIRMF VADGGECLVA QSYAKNMGLY
301: GERVGALSIV CKSADVAGRV ESQLKLVIRP MYSSPPIHGA SIVAVILRDK NLFNEWTLEL KAMADRIISM RKQLFEALRT RGTPGDWSHI IKQIGMFTFT
401: GLNPAQVSFM TKEYHIYMTS DGRISMAGLS SKTVPHLADA IHAVVTKAV

Arabidopsis Description

ASP3Aspartate aminotransferase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46644]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.