Factsheet for Zm00001d043382_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

extracellular: 20408568
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G305400.1	Wheat	cytosol, peroxisome	78.21	92.76
KXG33419	Sorghum	plastid	92.59	92.59
TraesCS3B01G331100.1	Wheat	golgi	84.97	85.9
Os01t0760600-01	Rice	plastid	85.4	85.22
GSMUA_Achr4P08110_001	Banana	cytosol	78.0	85.04
VIT_11s0016g03720.t01	Wine grape	cytosol	75.38	84.18
PGSC0003DMT400040385	Potato	cytosol	74.07	83.74
GSMUA_Achr7P25170_001	Banana	cytosol, peroxisome, plastid	76.91	83.25
Solyc07g032740.2.1	Tomato	plastid, unclear	64.49	82.91
KRH62024	Soybean	nucleus	74.51	82.21
HORVU3Hr1G073220.8	Barley	mitochondrion, plastid	86.06	80.94
VIT_04s0008g03770.t01	Wine grape	cytosol	74.07	80.57
PGSC0003DMT400028106	Potato	plastid	78.65	79.69
Solyc08g068330.2.1	Tomato	plastid	78.21	79.42
AT5G11520.1	Thale cress	plastid	76.25	77.95
CDX70399	Canola	plastid	76.03	77.56
KRH52682	Soybean	endoplasmic reticulum	76.91	77.41
Bra006103.1-P	Field mustard	plastid	76.03	77.21
CDX78428	Canola	plastid	76.03	77.21
CDX91212	Canola	plastid	44.88	67.1
Zm00001d016198_P003	Maize	mitochondrion	45.1	48.14
Zm00001d018386_P005	Maize	plastid	48.8	47.66

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	EntrezGene:100273311
MapMan:25.1.7	Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	InterPro:Asp_trans	UniProt:B4FUH2
EMBL:BT040760	GO:GO:0003674	GO:GO:0003824	GO:GO:0004069	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006520	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058	GO:GO:0009536	GO:GO:0009987
GO:GO:0010150	GO:GO:0016020	GO:GO:0016740	GO:GO:0030170	GO:GO:0080130	InterPro:IPR015421
InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS	ProteinID:ONM37720.1	PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105
PANTHER:PTHR11879	PANTHER:PTHR11879:SF33	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
UniParc:UPI00017B78EB	EnsemblPlantsGene:Zm00001d043382	EnsemblPlants:Zm00001d043382_P001	EnsemblPlants:Zm00001d043382_T001	SEG:seg	:

Description

glutamate-oxaloacetate transaminase1 glutamate-oxaloacetate transaminase1

Coordinates

chr3:+:198283208..198288738

Molecular Weight (calculated)

50185.3 Da

IEP (calculated)

8.561

GRAVY (calculated)

-0.117

Length

459 amino acids

Sequence
(BLAST)

001: MAPANVRAAQ AQAPSADRRL STLVGHLLPS SPRRAAADTS ATSTLESFPT MASQGSSVFA ALEQAPEDPI LGVTVAYNKD PSPVKVNLGV GAYRTEEGKP
101: LVLNVVRRAE QMLINNPSRV KEYLPITGLA EFNKLSAKLI FGADSPAIQE NRVATVQCLS GTGSLRVGGE FLARHYHERT IYIPQPTWGN HPKVFTLSGL
201: NVRSYRYYDP ATCSLHFEGL LEDLGSAPSG SIVLLHACAH NPTGVDPTIE QWEQIRQLMR SKSLLPFFDS AYQGFASGSL DKDAQSVRMF VADGGELLMA
301: QSYAKNMGLY GERVGALSIV CKSADVAVRV ESQLKLVIRP MYSNPPLHGA SIVATILRDS EMFNEWTLEL KAMADRIINM RQQLFNALKS RGTPGDWSHI
401: IKQIGMFTFT GLNSEQVAFM RQEYHIYMTS DGRISMAGLS MRTVPHLADA IHAAVTQLK

Best Arabidopsis Sequence Match ( AT5G11520.1 )
(BLAST)

001: MKTTHFSSSS SSDRRIGALL RHLNSGSDSD NLSSLYASPT SGGTGGSVFS HLVQAPEDPI LGVTVAYNKD PSPVKLNLGV GAYRTEEGKP LVLNVVRKAE
101: QQLINDRTRI KEYLPIVGLV EFNKLSAKLI LGADSPAIRE NRITTVECLS GTGSLRVGGE FLAKHYHQKT IYITQPTWGN HPKIFTLAGL TVKTYRYYDP
201: ATRGLNFQGL LEDLGAAAPG SIVLLHACAH NPTGVDPTIQ QWEQIRKLMR SKGLMPFFDS AYQGFASGSL DTDAKPIRMF VADGGECLVA QSYAKNMGLY
301: GERVGALSIV CKSADVAGRV ESQLKLVIRP MYSSPPIHGA SIVAVILRDK NLFNEWTLEL KAMADRIISM RKQLFEALRT RGTPGDWSHI IKQIGMFTFT
401: GLNPAQVSFM TKEYHIYMTS DGRISMAGLS SKTVPHLADA IHAVVTKAV

Arabidopsis Description

ASP3Aspartate aminotransferase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46644]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.