CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78428	Canola	plastid	98.0	97.57
AT5G11520.1	Thale cress	plastid	90.89	91.09
CDX91212	Canola	plastid	56.89	83.39
GSMUA_Achr4P08110_001	Banana	cytosol	78.0	83.37
TraesCS3A01G305400.1	Wheat	cytosol, peroxisome	71.33	82.95
KRH62024	Soybean	nucleus	76.67	82.93
VIT_04s0008g03770.t01	Wine grape	cytosol	77.33	82.46
GSMUA_Achr7P25170_001	Banana	cytosol, peroxisome, plastid	76.89	81.6
CDX92520	Canola	cytosol	72.22	80.25
CDY65959	Canola	cytosol	71.78	79.75
PGSC0003DMT400028106	Potato	plastid	80.22	79.69
CDY44925	Canola	cytosol	71.56	79.51
CDY42276	Canola	cytosol	71.56	79.51
Solyc08g068330.2.1	Tomato	plastid	79.78	79.42
KRH52682	Soybean	endoplasmic reticulum	80.0	78.95
KXG33419	Sorghum	plastid	78.0	76.47
Zm00001d043382_P001	Maize	plasma membrane	77.56	76.03
TraesCS3B01G331100.1	Wheat	golgi	76.44	75.77
Os01t0760600-01	Rice	plastid	76.89	75.22
CDY71396	Canola	cytosol	39.78	74.58
HORVU3Hr1G073220.8	Barley	mitochondrion, plastid	76.89	70.9
CDY39814	Canola	cytosol	61.78	68.64
CDY20276	Canola	cytosol	61.33	68.15
CDY32206	Canola	cytosol	60.89	67.65
CDY46924	Canola	cytosol	60.0	66.67
CDY31847	Canola	cytosol	60.0	66.67
CDY34689	Canola	endoplasmic reticulum, vacuole	58.89	60.5
CDX97776	Canola	mitochondrion	46.44	48.72
CDY13467	Canola	plastid	49.11	48.68
CDY58981	Canola	mitochondrion	46.0	48.48
CDY10765	Canola	mitochondrion	45.56	48.35
CDX72339	Canola	plastid	49.33	48.16
CDY52691	Canola	mitochondrion	42.44	47.04
CDX72238	Canola	mitochondrion	20.44	43.81
CDX68807	Canola	plastid	49.56	43.47
CDY25702	Canola	vacuole	13.78	42.76

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	GO:A0A078C2C3	InterPro:Aminotransferase_I/II	InterPro:Asp_trans	EnsemblPlants:CDX70399
ProteinID:CDX70399	ProteinID:CDX70399.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004069	GO:GO:0005488
GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	GO:GO:0030170	GO:GO:0080130	EnsemblPlantsGene:GSBRNA2T00140204001	InterPro:IPR015421	InterPro:IPR015422
InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879	PANTHER:PTHR11879:SF33
MetaCyc:PWY-5913	MetaCyc:PWY-6318	MetaCyc:PWY-6638	MetaCyc:PWY-6642	MetaCyc:PWY-6643	MetaCyc:PWY-7115
MetaCyc:PWY-7117	MetaCyc:PWY-7383	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
UniParc:UPI0004EEB1EA	:	:	:	:	:

Description

BnaC03g04830D

Coordinates

chrLK031791:-:252433..255388

Molecular Weight (calculated)

49135.4 Da

IEP (calculated)

9.722

GRAVY (calculated)

-0.094

Length

450 amino acids

Sequence
(BLAST)

001: MKTNDFSSST SPSDRRIGAL FRHLTAGTDA DRVSSVFASP TSGGAGGSVF AHLVQAPEDA ILGVTIAYNK DPSPIKLNLG VGAYRTEEGK PLVLNVVRKA
101: EQQLINDRSR IKEYLPIVGL VEFNKLSAKL ILGADSPAIR ENRVTTVECL SGTGSLRVGG EFLARHYHQK TIYIPQPTWG NHPKIFTLAG LSVKTYRYYD
201: PSTRGLNFQG LLEDLGAAPQ GSIVLLHACA HNPTGVDPTL EQWEQIRKLM RSKGLMPFFD SAYQGFASGS LDTDAKPIRM FVADGGELLV AQSYAKNMGL
301: YGERVGALSI VCKAADVAGR VESQLKLVIR PMYSNPPIHG ASIVAVILRD RNLFNEWTLE LKAMADRIIS MRKQLFEALR ARGTPGDWTH IIKQIGMFTF
401: TGLNPAQVSY MTKEYHIYMT SDGRISMAGL SSKTVPHLAD AIHAVVTKAL

Best Arabidopsis Sequence Match ( AT5G11520.1 )
(BLAST)

001: MKTTHFSSSS SSDRRIGALL RHLNSGSDSD NLSSLYASPT SGGTGGSVFS HLVQAPEDPI LGVTVAYNKD PSPVKLNLGV GAYRTEEGKP LVLNVVRKAE
101: QQLINDRTRI KEYLPIVGLV EFNKLSAKLI LGADSPAIRE NRITTVECLS GTGSLRVGGE FLAKHYHQKT IYITQPTWGN HPKIFTLAGL TVKTYRYYDP
201: ATRGLNFQGL LEDLGAAAPG SIVLLHACAH NPTGVDPTIQ QWEQIRKLMR SKGLMPFFDS AYQGFASGSL DTDAKPIRMF VADGGECLVA QSYAKNMGLY
301: GERVGALSIV CKSADVAGRV ESQLKLVIRP MYSSPPIHGA SIVAVILRDK NLFNEWTLEL KAMADRIISM RKQLFEALRT RGTPGDWSHI IKQIGMFTFT
401: GLNPAQVSFM TKEYHIYMTS DGRISMAGLS SKTVPHLADA IHAVVTKAV

Arabidopsis Description

ASP3Aspartate aminotransferase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46644]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.