CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39814	Canola	cytosol	97.92	58.02
CDY20276	Canola	cytosol	93.75	55.56
CDY32206	Canola	cytosol	93.33	55.31
CDY31847	Canola	cytosol	89.58	53.09
CDY46924	Canola	cytosol	89.17	52.84
CDY34689	Canola	endoplasmic reticulum, vacuole	94.58	51.83
AT1G62800.2	Thale cress	cytosol, peroxisome, plastid	86.67	51.36
CDX92520	Canola	cytosol	82.5	48.89
CDY65959	Canola	cytosol	82.08	48.64
CDY42276	Canola	cytosol	82.08	48.64
CDY44925	Canola	cytosol	81.25	48.15
CDX70399	Canola	plastid	74.58	39.78
CDX78428	Canola	plastid	74.17	39.38
CDX72238	Canola	mitochondrion	34.17	39.05
CDY52691	Canola	mitochondrion	49.17	29.06
CDY10765	Canola	mitochondrion	50.83	28.77
CDY58981	Canola	mitochondrion	50.42	28.34
CDX97776	Canola	mitochondrion	50.42	28.21
CDX72339	Canola	plastid	52.92	27.55
CDY13467	Canola	plastid	52.08	27.53
CDX91212	Canola	plastid	32.08	25.08
CDX68807	Canola	plastid	52.5	24.56
CDY25702	Canola	vacuole	0.0	0.0

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	GO:A0A078K0T2	UniProt:A0A078K0T2	InterPro:Aminotransferase_I/II	InterPro:Asp_trans
EnsemblPlants:CDY71396	ProteinID:CDY71396	ProteinID:CDY71396.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004069
GO:GO:0005488	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	GO:GO:0080130	EnsemblPlantsGene:GSBRNA2T00014571001	InterPro:IPR015421
InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879
PANTHER:PTHR11879:SF33	MetaCyc:PWY-5913	MetaCyc:PWY-6318	MetaCyc:PWY-6638	MetaCyc:PWY-6642	MetaCyc:PWY-6643
MetaCyc:PWY-7115	MetaCyc:PWY-7117	MetaCyc:PWY-7383	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI0004EE21AD	:	:	:	:

Description

BnaCnng72730DAspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:A0A078K0T2]

Coordinates

chrLK045660:-:945..2586

Molecular Weight (calculated)

26444.2 Da

IEP (calculated)

7.551

GRAVY (calculated)

-0.009

Length

240 amino acids

Sequence
(BLAST)

001: MLEDLGAAPS GALVVLQACA HNPTGIDPTL EQWEQIRQIV RSKGLLPFFD NAYQGFASGN LDSDAQSVRM FVADGGECLI AQSFAKNMGL YGERIGALTI
101: VCTSEDVARK VKSQLLLVVR PMYLSPPIHG ASIVTTILKN SDMYKDWTIE LKGMADRIIS MRQQLYEAIQ ARGTPGDWSH IIKQIGMFSF TGLNEKQVRM
201: MAKEYHIYMT YDGRISMAGL SSKTVPQLAD AIHAAVTRIP

Best Arabidopsis Sequence Match ( AT1G62800.1 )
(BLAST)

001: MNSILSSVLP APEDPVLSVI FACRDDPSPV KLNLSAGTYR TEEGKPLVLD VVRRAEQQLA NDLDKEYLPL NGLPEFNKLS TKLILGDDSP ALKENRVVTT
101: QCLSGTGSLR VGAEFLATHN KESVIFVPNP TWGNHPRIFT LAGLSVQYFR YYDPKSRGLD FKGMLEDLGA APPGAIVVLQ ACAHNPTGVD PTFEQWEKIR
201: RLVRSKSLLP FFDSAYQGFA SGSLDADAQA VRMFVADGGE CLIAQSYAKN MGLYGERIGS LTIVCTSEDV AKKVENQVLL VVRPMYLTPP IHGASIVATI
301: LKNSDMYNDW TIELKGMADR IISMRQQLYA ALEARGTPGD WSHIIKHIGM FTFTGLSEEQ VRLMAKEYHI YMTYDGRISM ASLSSKTVPQ LADAIHAVVT
401: RIA

Arabidopsis Description

ASP4Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:F4I0D4]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.