CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92520	Canola	cytosol	98.77	98.77
CDY42276	Canola	cytosol	97.53	97.53
CDY44925	Canola	cytosol	97.04	97.04
AT5G19550.1	Thale cress	cytosol	92.59	92.59
CDY71396	Canola	cytosol	48.64	82.08
CDY20276	Canola	cytosol	74.81	74.81
CDY32206	Canola	cytosol	74.57	74.57
CDY39814	Canola	cytosol	74.32	74.32
CDY31847	Canola	cytosol	73.33	73.33
CDY46924	Canola	cytosol	72.59	72.59
CDX70399	Canola	plastid	79.75	71.78
CDX78428	Canola	plastid	79.51	71.24
CDY34689	Canola	endoplasmic reticulum, vacuole	70.86	65.53
CDX91212	Canola	plastid	47.65	62.87
CDY10765	Canola	mitochondrion	49.88	47.64
CDX97776	Canola	mitochondrion	50.37	47.55
CDY58981	Canola	mitochondrion	50.12	47.54
CDY13467	Canola	plastid	53.09	47.36
CDX72339	Canola	plastid	53.09	46.64
CDX72238	Canola	mitochondrion	23.7	45.71
CDY52691	Canola	mitochondrion	45.43	45.32
CDY25702	Canola	vacuole	15.31	42.76
CDX68807	Canola	plastid	53.33	42.11

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	GO:A0A078JGW9	UniProt:A0A078JGW9	InterPro:Aminotransferase_I/II	InterPro:Asp_trans
EnsemblPlants:CDY65959	ProteinID:CDY65959	ProteinID:CDY65959.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004069
GO:GO:0005488	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	GO:GO:0080130	EnsemblPlantsGene:GSBRNA2T00051069001	InterPro:IPR015421
InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879
PANTHER:PTHR11879:SF33	MetaCyc:PWY-5913	MetaCyc:PWY-6318	MetaCyc:PWY-6638	MetaCyc:PWY-6642	MetaCyc:PWY-6643
MetaCyc:PWY-7115	MetaCyc:PWY-7117	MetaCyc:PWY-7383	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI0004EDEDEA	:	:	:	:

Description

BnaC09g54080DAspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:A0A078JGW9]

Coordinates

chrLK035018:-:5816..9488

Molecular Weight (calculated)

44210.1 Da

IEP (calculated)

7.340

GRAVY (calculated)

-0.064

Length

405 amino acids

Sequence
(BLAST)

001: MDSVFSNVDR APEDPILGVT VAYNNDPSPA KLNLGVGAYR TEEGKPLVLD VVRRAEQQLV NDPSRVKEYI PIAGLADFNK LSAKLILGAD SPAIQESRVA
101: TIQCLSGTGS LRVGAEFLKK HYHQCVIFIP KPTWGNHPKV FNLAGLSVEY YRYYDPATRG LDFQGLLEDL GAAPSGAIVL LHACAHNPTG VDPTSEQWEK
201: IRQLIRSKSL LPFFDSAYQG FASGSLDTDA HSVRTFVADG GECLIAQSYA KNMGLYGERV GALSIVCKSA DVASKVESQV KLVVRPMYSS PPIHGASIVA
301: TILKSSDMYN DWTIELKGMA DRIISMRQQL FEALQAKGTP GDWSHIIKQI GMFTFTGLNK EQVAFMTKEY HIYMTSDGRI SMAGLSTKTV PHLVDAIHAA
401: VTRVV

Best Arabidopsis Sequence Match ( AT5G19550.1 )
(BLAST)

001: MDSVFSNVAR APEDPILGVT VAYNNDPSPV KINLGVGAYR TEEGKPLVLD VVRKAEQQLV NDPSRVKEYI PIVGISDFNK LSAKLILGAD SPAITESRVT
101: TVQCLSGTGS LRVGAEFLKT HYHQSVIYIP KPTWGNHPKV FNLAGLSVEY FRYYDPATRG LDFKGLLEDL GAAPSGAIVL LHACAHNPTG VDPTSEQWEQ
201: IRQLMRSKSL LPFFDSAYQG FASGSLDTDA QSVRTFVADG GECLIAQSYA KNMGLYGERV GALSIVCKSA DVASKVESQV KLVVRPMYSS PPIHGASIVA
301: TILKSSDMYN NWTIELKEMA DRIKSMRQQL FEAIQARGTP GDWSHIIKQI GMFTFTGLNK EQVEFMTKEF HIYMTSDGRI SMAGLSSKTV PHLADAMHAA
401: VTRLG

Arabidopsis Description

ASP2Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:Q1EBW2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.