CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 5
plasma membrane 3
golgi 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20276	Canola	cytosol	68.28	24.44
CDY32206	Canola	cytosol	67.59	24.2
CDY39814	Canola	cytosol	66.9	23.95
CDY34689	Canola	endoplasmic reticulum, vacuole	71.72	23.74
AT1G62800.2	Thale cress	cytosol, peroxisome, plastid	59.31	21.23
CDY46924	Canola	cytosol	53.1	19.01
CDY31847	Canola	cytosol	52.41	18.77
CDY42276	Canola	cytosol	42.76	15.31
CDY44925	Canola	cytosol	42.76	15.31
CDX92520	Canola	cytosol	42.76	15.31
CDY65959	Canola	cytosol	42.76	15.31
CDX91212	Canola	plastid	31.72	14.98
CDX70399	Canola	plastid	42.76	13.78
CDX78428	Canola	plastid	42.76	13.72
CDY10765	Canola	mitochondrion	26.9	9.2
CDX97776	Canola	mitochondrion	26.21	8.86
CDY58981	Canola	mitochondrion	25.52	8.67
CDY13467	Canola	plastid	26.21	8.37
CDX72339	Canola	plastid	26.21	8.24
CDY52691	Canola	mitochondrion	22.07	7.88
CDX68807	Canola	plastid	26.21	7.41
CDX72238	Canola	mitochondrion	0.69	0.48
CDY71396	Canola	cytosol	0.0	0.0

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	Gene3D:3.40.640.10
MapMan:35.1	GO:A0A078GKM3	UniProt:A0A078GKM3	InterPro:Aminotransferase_I/II	InterPro:Asp_trans	EnsemblPlants:CDY25702
ProteinID:CDY25702	ProteinID:CDY25702.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006520
GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0030170	EnsemblPlantsGene:GSBRNA2T00033050001	InterPro:IPR015421	PFAM:PF00155	PANTHER:PTHR11879	PANTHER:PTHR11879:SF33
MetaCyc:PWY-5913	MetaCyc:PWY-6318	MetaCyc:PWY-6638	MetaCyc:PWY-6642	MetaCyc:PWY-6643	MetaCyc:PWY-7115
MetaCyc:PWY-7117	MetaCyc:PWY-7383	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0004EE5938

Description

BnaC03g69730DBnaC03g69730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GKM3]

Coordinates

chrLK032179:+:193032..194755

Molecular Weight (calculated)

16037.6 Da

IEP (calculated)

6.612

GRAVY (calculated)

0.182

Length

145 amino acids

Sequence
(BLAST)

001: MTVLFFFQIH CRLINHFVMT SILSNVLPTP EDPVLSAFNL ICMVTKHVIF ACRDDPCPEG KPLVLEVVRK AEQQLANDLS CDKGYLPIDG LADFNKLSAK
101: LILGDDSHAV GENRVVTIQC LSGTGSLRIG AEFLTKHHQQ VNVPH

Best Arabidopsis Sequence Match ( AT1G62800.1 )
(BLAST)

001: MNSILSSVLP APEDPVLSVI FACRDDPSPV KLNLSAGTYR TEEGKPLVLD VVRRAEQQLA NDLDKEYLPL NGLPEFNKLS TKLILGDDSP ALKENRVVTT
101: QCLSGTGSLR VGAEFLATHN KESVIFVPNP TWGNHPRIFT LAGLSVQYFR YYDPKSRGLD FKGMLEDLGA APPGAIVVLQ ACAHNPTGVD PTFEQWEKIR
201: RLVRSKSLLP FFDSAYQGFA SGSLDADAQA VRMFVADGGE CLIAQSYAKN MGLYGERIGS LTIVCTSEDV AKKVENQVLL VVRPMYLTPP IHGASIVATI
301: LKNSDMYNDW TIELKGMADR IISMRQQLYA ALEARGTPGD WSHIIKHIGM FTFTGLSEEQ VRLMAKEYHI YMTYDGRISM ASLSSKTVPQ LADAIHAVVT
401: RIA

Arabidopsis Description

ASP4Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:F4I0D4]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.