CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32206	Canola	cytosol	97.28	97.28
CDY71396	Canola	cytosol	55.56	93.75
CDY39814	Canola	cytosol	93.58	93.58
CDY34689	Canola	endoplasmic reticulum, vacuole	92.84	85.84
AT1G62800.2	Thale cress	cytosol, peroxisome, plastid	84.94	84.94
CDY46924	Canola	cytosol	82.72	82.72
CDY31847	Canola	cytosol	82.72	82.72
CDY65959	Canola	cytosol	74.81	74.81
CDX92520	Canola	cytosol	74.57	74.57
CDY42276	Canola	cytosol	74.32	74.32
CDY44925	Canola	cytosol	74.07	74.07
CDY25702	Canola	vacuole	24.44	68.28
CDX70399	Canola	plastid	68.15	61.33
CDX78428	Canola	plastid	67.9	60.84
CDX91212	Canola	plastid	39.01	51.47
CDY13467	Canola	plastid	47.16	42.07
CDX72339	Canola	plastid	47.41	41.65
CDX72238	Canola	mitochondrion	20.99	40.48
CDX97776	Canola	mitochondrion	42.47	40.09
CDY58981	Canola	mitochondrion	42.22	40.05
CDY52691	Canola	mitochondrion	39.75	39.66
CDY10765	Canola	mitochondrion	41.48	39.62
CDX68807	Canola	plastid	47.41	37.43

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	GO:A0A078G4D5	UniProt:A0A078G4D5	InterPro:Aminotransferase_I/II	InterPro:Asp_trans
EnsemblPlants:CDY20276	ProteinID:CDY20276	ProteinID:CDY20276.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004069
GO:GO:0005488	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	GO:GO:0080130	EnsemblPlantsGene:GSBRNA2T00012185001	InterPro:IPR015421
InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879
PANTHER:PTHR11879:SF33	MetaCyc:PWY-5913	MetaCyc:PWY-6318	MetaCyc:PWY-6638	MetaCyc:PWY-6642	MetaCyc:PWY-6643
MetaCyc:PWY-7115	MetaCyc:PWY-7117	MetaCyc:PWY-7383	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI0004EE4353	:	:	:	:

Description

BnaC04g36800DAspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:A0A078G4D5]

Coordinates

chrLK032105:-:181995..185338

Molecular Weight (calculated)

44643.9 Da

IEP (calculated)

6.844

GRAVY (calculated)

-0.039

Length

405 amino acids

Sequence
(BLAST)

001: MSSILSNVLP APEDPVLSVI FACRDDPCPV KLNLSAGAYR TEEGKPLVLE VVRKAEQQLA NDLSCDKGYL PIDGLADFNK LSAKLILGDD SHAVEENRVV
101: TIQCLSGTGS LRVGAEFLAK HHQQRVVFVP NPTWGNHPFI FTLAGLSVEY FRYYDPQTRG LDFEGMLKDL GAAPPGAIVV LQSCAHNPTG IDPTLEQWEK
201: IRQIVRSKGL LPFFDNAYQG FASGNLDSDA QSVRMFVADG GECLIAQSFA KNMGLYGERI GALTIVCTSQ DVARKIHSQV LLVVRPMYLS PPIHGASIVT
301: TILKNSDMYK DWTIELKGMA DRIISMRQQL YEAIQARGTP GDWSHIIKQI GMFSFTGLNE KQVRWMAKEY HIYITYDGRI SIASLSSKTV PQLADAIHAA
401: VTRLA

Best Arabidopsis Sequence Match ( AT1G62800.2 )
(BLAST)

001: MNSILSSVLP APEDPVLSVI FACRDDPSPV KLNLSAGTYR TEEGKPLVLD VVRRAEQQLA NDLSRDKEYL PLNGLPEFNK LSTKLILGDD SPALKENRVV
101: TTQCLSGTGS LRVGAEFLAT HNKESVIFVP NPTWGNHPRI FTLAGLSVQY FRYYDPKSRG LDFKGMLEDL GAAPPGAIVV LQACAHNPTG VDPTFEQWEK
201: IRRLVRSKSL LPFFDSAYQG FASGSLDADA QAVRMFVADG GECLIAQSYA KNMGLYGERI GSLTIVCTSE DVAKKVENQV LLVVRPMYLT PPIHGASIVA
301: TILKNSDMYN DWTIELKGMA DRIISMRQQL YAALEARGTP GDWSHIIKHI GMFTFTGLSE EQVRLMAKEY HIYMTYDGRI SMASLSSKTV PQLADAIHAV
401: VTRIA

Arabidopsis Description

ASP4Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:F4I0D4]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.