CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 4
plasma membrane 3
golgi 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71396	Canola	cytosol	51.83	94.58
CDY20276	Canola	cytosol	85.84	92.84
CDY32206	Canola	cytosol	85.39	92.35
CDY39814	Canola	cytosol	82.19	88.89
AT1G62800.2	Thale cress	cytosol, peroxisome, plastid	74.66	80.74
CDY46924	Canola	cytosol	72.6	78.52
CDY31847	Canola	cytosol	72.6	78.52
CDY25702	Canola	vacuole	23.74	71.72
CDY65959	Canola	cytosol	65.53	70.86
CDX92520	Canola	cytosol	65.3	70.62
CDY42276	Canola	cytosol	65.07	70.37
CDY44925	Canola	cytosol	64.84	70.12
CDX70399	Canola	plastid	60.5	58.89
CDX78428	Canola	plastid	60.27	58.41
CDX91212	Canola	plastid	34.7	49.51
CDY13467	Canola	plastid	43.15	41.63
CDX72339	Canola	plastid	43.61	41.43
CDX97776	Canola	mitochondrion	39.04	39.86
CDY58981	Canola	mitochondrion	38.81	39.81
CDY10765	Canola	mitochondrion	38.13	39.39
CDY52691	Canola	mitochondrion	35.84	38.67
CDX72238	Canola	mitochondrion	18.26	38.1
CDX68807	Canola	plastid	43.38	37.04

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	GO:A0A078HB27	UniProt:A0A078HB27	InterPro:Aminotransferase_I/II	InterPro:Asp_trans
EnsemblPlants:CDY34689	ProteinID:CDY34689	ProteinID:CDY34689.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004069
GO:GO:0005488	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	GO:GO:0080130	EnsemblPlantsGene:GSBRNA2T00057197001	InterPro:IPR015421
InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879
PANTHER:PTHR11879:SF33	MetaCyc:PWY-5913	MetaCyc:PWY-6318	MetaCyc:PWY-6638	MetaCyc:PWY-6642	MetaCyc:PWY-6643
MetaCyc:PWY-7115	MetaCyc:PWY-7117	MetaCyc:PWY-7383	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	UniParc:UPI0004EF27BD	:	:	:	:

Description

BnaC04g19940DAspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:A0A078HB27]

Coordinates

chrLK032339:-:335420..338957

Molecular Weight (calculated)

48501.6 Da

IEP (calculated)

7.102

GRAVY (calculated)

0.005

Length

438 amino acids

Sequence
(BLAST)

001: MTVLFFFQIH CRLINHLVMS SILSNVLPAP EDPVLSVIFA CRDDPCPVKL NVSAGAYRTE EGKPLVLEVV RKAEQQLAND LSCDKGYLPI DGLADFNKLS
101: AKLTLGDDSH AVEENRVVTI QCLSAITGFL SVHLRAPGYA KWSGGREAAH VNTPRPVPNP TWGNHPFIFT LAGLCVEYFR YYDPQTRGLD FEGMLEDLGA
201: APSGAIVVLQ SCAHNPTGID PTLEQWEKIR QIVRSKGLLP FFDNAYQVRC TTTFAFGNLD SDAQSVRMFV ADGGECLIAQ SFAKNMGLYG ERIGALTIVC
301: TSQDVARKVH SQVLLVVRPM YLSPPIHGAS IVTTILKNSD MYKDWTIELK GMADRIISMR QQLYEAIQAR GTPGDWTHII KQIGMFSFTG LNEKQVRWMA
401: KEYHIYMTYD GRISIASLSS KTVPQLADAI HAAVTRIA

Best Arabidopsis Sequence Match ( AT1G62800.1 )
(BLAST)

001: MNSILSSVLP APEDPVLSVI FACRDDPSPV KLNLSAGTYR TEEGKPLVLD VVRRAEQQLA NDLDKEYLPL NGLPEFNKLS TKLILGDDSP ALKENRVVTT
101: QCLSGTGSLR VGAEFLATHN KESVIFVPNP TWGNHPRIFT LAGLSVQYFR YYDPKSRGLD FKGMLEDLGA APPGAIVVLQ ACAHNPTGVD PTFEQWEKIR
201: RLVRSKSLLP FFDSAYQGFA SGSLDADAQA VRMFVADGGE CLIAQSYAKN MGLYGERIGS LTIVCTSEDV AKKVENQVLL VVRPMYLTPP IHGASIVATI
301: LKNSDMYNDW TIELKGMADR IISMRQQLYA ALEARGTPGD WSHIIKHIGM FTFTGLSEEQ VRLMAKEYHI YMTYDGRISM ASLSSKTVPQ LADAIHAVVT
401: RIA

Arabidopsis Description

ASP4Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:F4I0D4]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.