CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58981	Canola	mitochondrion	85.22	81.03
CDY10765	Canola	mitochondrion	84.24	80.66
CDX97776	Canola	mitochondrion	85.22	80.65
AT2G30970.1	Thale cress	mitochondrion	83.5	78.84
VIT_12s0028g01820.t01	Wine grape	mitochondrion	78.08	74.94
TraesCS7B01G274100.1	Wheat	mitochondrion	76.6	73.0
TraesCS7A01G353500.1	Wheat	mitochondrion	76.6	73.0
Solyc07g055210.2.1	Tomato	extracellular, mitochondrion, plastid	76.35	72.94
TraesCS7D01G369300.1	Wheat	mitochondrion	76.35	72.77
PGSC0003DMT400052597	Potato	mitochondrion	75.86	72.47
TraesCS6B01G026900.1	Wheat	mitochondrion	75.62	72.07
GSMUA_Achr6P14650_001	Banana	mitochondrion	76.11	72.03
TraesCS6A01G018600.1	Wheat	golgi, mitochondrion	75.37	71.83
Os02t0236000-01	Rice	mitochondrion	75.86	71.3
Zm00001d016198_P003	Maize	mitochondrion	75.12	70.93
KRH55720	Soybean	mitochondrion	74.38	70.73
TraesCS6D01G022800.1	Wheat	mitochondrion	74.88	70.53
KXG29888	Sorghum	mitochondrion	74.63	70.47
Os06t0548000-01	Rice	mitochondrion	76.35	66.95
HORVU6Hr1G003470.2	Barley	plastid	75.12	63.81
HORVU7Hr1G089290.4	Barley	cytosol	75.86	58.33
HORVU2Hr1G033320.4	Barley	cytosol	8.87	49.32
CDY71396	Canola	cytosol	29.06	49.17
CDX92520	Canola	cytosol	45.57	45.68
CDY65959	Canola	cytosol	45.32	45.43
CDY42276	Canola	cytosol	44.83	44.94
CDY44925	Canola	cytosol	44.83	44.94
CDX70399	Canola	plastid	47.04	42.44
CDX78428	Canola	plastid	47.04	42.26
CDY39814	Canola	cytosol	42.12	42.22
CDY31847	Canola	cytosol	41.87	41.98
CDY46924	Canola	cytosol	41.63	41.73
CDY32206	Canola	cytosol	40.15	40.25
CDY20276	Canola	cytosol	39.66	39.75
CDY13467	Canola	plastid	42.86	38.33
CDX72339	Canola	plastid	42.86	37.74
CDX91212	Canola	plastid	28.33	37.46
CDY34689	Canola	endoplasmic reticulum, vacuole	38.67	35.84
CDX72238	Canola	mitochondrion	18.23	35.24
CDX68807	Canola	plastid	42.86	33.92
CDY25702	Canola	vacuole	7.88	22.07

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	GO:A0A078IS58	UniProt:A0A078IS58	InterPro:Aminotransferase_I/II	InterPro:Asp_trans
EnsemblPlants:CDY52691	ProteinID:CDY52691	ProteinID:CDY52691.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004069
GO:GO:0005488	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	GO:GO:0080130	EnsemblPlantsGene:GSBRNA2T00007601001	InterPro:IPR015421
InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879
PANTHER:PTHR11879:SF18	MetaCyc:PWY-5913	MetaCyc:PWY-6318	MetaCyc:PWY-6638	MetaCyc:PWY-6642	MetaCyc:PWY-6643
MetaCyc:PWY-7115	MetaCyc:PWY-7117	MetaCyc:PWY-7383	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	TMHMM:TMhelix	UniParc:UPI0004EEA314	:	:	:

Description

BnaC04g54310DAspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:A0A078IS58]

Coordinates

chrLK033118:+:25134..27705

Molecular Weight (calculated)

45661.4 Da

IEP (calculated)

8.785

GRAVY (calculated)

-0.200

Length

406 amino acids

Sequence
(BLAST)

001: MAMMAMTIRN SASRRTMMSR PIFGSRSMSL FSLILVPTKL TLVWEHIVMI IGKPVVLDCV REAERRIAGT SFMEYLPMGG SVKMVEETLK LAYGDNSQFI
101: KDKRIAAVQS LSGTGACRLF ADFQNRFCPA SQIYIPVPTW SNHHNIWRDA QVPQKTYHYY HPETKGLDFK GLMDDVKNAP EGSFFLLHAC AHNPTGVDPT
201: EEQWREISQL FKAKKHFAFF DMAYQGFASG DPARDAKSIR IFLEDGHHIG ISQSYAKNMG LYGQRVGCLS VLCEDEKQAV TVKSQLQQLA RPMYSNPPLH
301: GAQIVSTILG DPELKSLWLK EVKIMADRII GMRTTLRDSL EKLGSPLSWE HIGMFCYSGL TPEQVDRLTS EYHIYMTRNG RISMAGVTTG NVGYLANAIH
401: EVTKSS

Best Arabidopsis Sequence Match ( AT2G30970.2 )
(BLAST)

001: MALAMMIRNA ASKRGMTPIS GHFGGLRSMS SWWKSVEPAP KDPILGVTEA FLADPSPEKV NVGVGAYRDD NGKPVVLECV REAEKRLAGS TFMEYLPMGG
101: SAKMVDLTLK LAYGDNSEFI KDKRIAAVQT LSGTGACRLF ADFQKRFSPG SQIYIPVPTW SNHHNIWKDA QVPQKTYHYY HPETKGLDFS ALMDDVKNAP
201: EGSFFLLHAC AHNPTGVDPT EEQWREISQL FKAKKHFAFF DMAYQGFASG DPARDAKSIR IFLEDGHHIG ISQSYAKNMG LYGQRVGCLS VLCEDPKQAV
301: AVKSQLQQLA RPMYSNPPLH GAQLVSTILE DPELKSLWLK EVKVMADRII GMRTTLRESL EKLGSPLSWE HVTKQIGMFC YSGLTPEQVD RLTSEYHIYM
401: TRNGRISMAG VTTGNVGYLA NAIHEVTKSS

Arabidopsis Description

ASP1Aspartate aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46643]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.