Factsheet for Solyc07g055210.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

plastid: 26371478
extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 26371478 doi

M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi

Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400052597	Potato	mitochondrion	98.12	98.12
VIT_12s0028g01820.t01	Wine grape	mitochondrion	84.47	84.87
Bra021682.1-P	Field mustard	mitochondrion	83.29	83.1
CDY58981	Canola	mitochondrion	83.06	82.67
TraesCS7D01G369300.1	Wheat	mitochondrion	82.82	82.63
CDX97776	Canola	mitochondrion	83.29	82.52
GSMUA_Achr6P14650_001	Banana	mitochondrion	83.06	82.28
TraesCS7B01G274100.1	Wheat	mitochondrion	82.35	82.16
TraesCS6B01G026900.1	Wheat	mitochondrion	81.88	81.69
TraesCS7A01G353500.1	Wheat	mitochondrion	81.88	81.69
Zm00001d016198_P003	Maize	mitochondrion	82.59	81.63
TraesCS6A01G018600.1	Wheat	golgi, mitochondrion	81.41	81.22
KXG29888	Sorghum	mitochondrion	81.65	80.7
TraesCS6D01G022800.1	Wheat	mitochondrion	81.41	80.28
AT2G30970.1	Thale cress	mitochondrion	81.18	80.23
Os02t0236000-01	Rice	mitochondrion	81.18	79.86
CDY10765	Canola	mitochondrion	79.29	79.48
Bra018286.1-P	Field mustard	mitochondrion	79.06	79.25
KRH55720	Soybean	mitochondrion	79.06	78.69
CDY52691	Canola	mitochondrion	72.94	76.35
Os06t0548000-01	Rice	mitochondrion	82.35	75.59
HORVU6Hr1G003470.2	Barley	plastid	81.18	72.18
HORVU7Hr1G089290.4	Barley	cytosol	80.94	65.15
Solyc10g075170.1.1	Tomato	mitochondrion	49.41	57.07
HORVU2Hr1G033320.4	Barley	cytosol	8.71	50.68
Solyc07g032740.2.1	Tomato	plastid, unclear	41.18	49.02
Solyc08g068330.2.1	Tomato	plastid	46.82	44.03
Solyc08g041870.2.1	Tomato	plastid	44.0	40.48

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	InterPro:Asp_trans	GO:GO:0003674	GO:GO:0003824
GO:GO:0004069	GO:GO:0005488	GO:GO:0005507	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	GO:GO:0046686	GO:GO:0080130
InterPro:IPR015421	InterPro:IPR015422	UniProt:K4CG60	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00799
ScanProsite:PS00105	PANTHER:PTHR11879	PANTHER:PTHR11879:SF18	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major
SUPFAM:SSF53383	EnsemblPlantsGene:Solyc07g055210.2	EnsemblPlants:Solyc07g055210.2.1	UniParc:UPI000276CA18	SEG:seg	:

Description

Aspartate aminotransferase, mitochondrial [Source:Projected from Arabidopsis thaliana (AT2G30970) UniProtKB/Swiss-Prot;Acc:P46643]

Coordinates

chr7:-:63320669..63325039

Molecular Weight (calculated)

47052.4 Da

IEP (calculated)

8.029

GRAVY (calculated)

-0.284

Length

425 amino acids

Sequence
(BLAST)

001: MAMRAAISGR QLKLSSSSFG ARSLSSWWRN VEPAPKDPIL GVTEAFLADP SPDKVNVGVG AYRDDNGKPV VLECVREAER RIAGGFNMEY LPMGGSVNMI
101: QESLKLAYGE NSDLIKDKRI AAIQALSGTG ACRIFADFQK RFCPDSQIYI PVPTWSNHHN IWRDAHVPEK TYHYYHAESK GLDFAAMMDD IKNAPKGSFF
201: LLHACAHNPT GVDPTEEQWR EISHQFKVKG HFALFDMAYQ GFASGYPEKD AKAIRIFLED GHPIACAQSY AKNMGLYGQR VGCLSVVCED EKQAVAVKSQ
301: LQQLARPMYS NPPLHGALVV STILGDPNLK TLWLGEVKGM ADRIIGMRTA LRGNLEKLGS PLSWEHITNQ IGMFCYSGMT PEQVDRLTKE YHIYMTRNGR
401: ISMAGVTTGN VGYLANAIHE VTKSA

Best Arabidopsis Sequence Match ( AT2G30970.2 )
(BLAST)

001: MALAMMIRNA ASKRGMTPIS GHFGGLRSMS SWWKSVEPAP KDPILGVTEA FLADPSPEKV NVGVGAYRDD NGKPVVLECV REAEKRLAGS TFMEYLPMGG
101: SAKMVDLTLK LAYGDNSEFI KDKRIAAVQT LSGTGACRLF ADFQKRFSPG SQIYIPVPTW SNHHNIWKDA QVPQKTYHYY HPETKGLDFS ALMDDVKNAP
201: EGSFFLLHAC AHNPTGVDPT EEQWREISQL FKAKKHFAFF DMAYQGFASG DPARDAKSIR IFLEDGHHIG ISQSYAKNMG LYGQRVGCLS VLCEDPKQAV
301: AVKSQLQQLA RPMYSNPPLH GAQLVSTILE DPELKSLWLK EVKVMADRII GMRTTLRESL EKLGSPLSWE HVTKQIGMFC YSGLTPEQVD RLTSEYHIYM
401: TRNGRISMAG VTTGNVGYLA NAIHEVTKSS

Arabidopsis Description

ASP1Aspartate aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46643]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.