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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 8
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400017112 Potato cytosol 87.5 77.59
VIT_08s0058g01000.t01 Wine grape mitochondrion 64.13 55.27
KRH76094 Soybean mitochondrion 60.05 51.28
Solyc07g055210.2.1 Tomato extracellular, mitochondrion, plastid 57.07 49.41
KRH65466 Soybean mitochondrion 36.96 41.85
Solyc07g032740.2.1 Tomato plastid, unclear 35.6 36.69
Solyc08g068330.2.1 Tomato plastid 39.4 32.08
Solyc08g041870.2.1 Tomato plastid 36.14 28.79
Protein Annotations
KEGG:00220+2.6.1.1KEGG:00250+2.6.1.1KEGG:00270+2.6.1.1KEGG:00330+2.6.1.1KEGG:00350+2.6.1.1KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1KEGG:00401+2.6.1.1KEGG:00710+2.6.1.1KEGG:00950+2.6.1.1KEGG:00960+2.6.1.1MapMan:25.1.7
Gene3D:3.40.640.10Gene3D:3.90.1150.10InterPro:Aminotransferase_I/IIInterPro:Asp_transGO:GO:0003674GO:GO:0003824
GO:GO:0004069GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005739GO:GO:0006520GO:GO:0008150GO:GO:0008152GO:GO:0008483GO:GO:0009058
GO:GO:0009987GO:GO:0016740GO:GO:0030170InterPro:IPR015421InterPro:IPR015422UniProt:K4D1V8
PFAM:PF00155PRINTS:PR00799PANTHER:PTHR11879PANTHER:PTHR11879:SF14InterPro:PyrdxlP-dep_TrfaseInterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_majorSUPFAM:SSF53383EnsemblPlantsGene:Solyc10g075170.1EnsemblPlants:Solyc10g075170.1.1UniParc:UPI0002769BF2:
Description
No Description!
Coordinates
chr10:+:58891402..58895882
Molecular Weight (calculated)
42043.0 Da
IEP (calculated)
8.275
GRAVY (calculated)
-0.457
Length
368 amino acids
Sequence
(BLAST)
001: MKMKMWSRNV RCLSTSVAKN RKNNMGWWDH VQQAPKDPIT SVTQAFLSDP TPFKLNLGVG AYRDDKGKPV TLECVRRATE KISDCEILES TKATTKSKFV
101: QDCVKLAYGN DSSVVREGRF AGVPALSGTG ACRLFAEFQR RFYPDSQMFL PMPTWSNHHD IWRDSQVCTG TYRYYDPDSK GLRFQALVND IKNAPDRSFF
201: LLHPCAHNPT GVDPNYEQWK EISHIFKEFI VSRDDKQATA IKSQLQRIVR AMYSSFPVHG PLLVSTILND ADLKALWEEE VKVMVDRLIS MRVTLRQTLE
301: ELNSSSSWEH VTKQVGMFYF SGLSPEEVNQ LQRDFHIYMT NDGRISMAGV TSSNVDYLAN AIHEVTKE
Best Arabidopsis Sequence Match ( AT2G30970.2 )
(BLAST)
001: MALAMMIRNA ASKRGMTPIS GHFGGLRSMS SWWKSVEPAP KDPILGVTEA FLADPSPEKV NVGVGAYRDD NGKPVVLECV REAEKRLAGS TFMEYLPMGG
101: SAKMVDLTLK LAYGDNSEFI KDKRIAAVQT LSGTGACRLF ADFQKRFSPG SQIYIPVPTW SNHHNIWKDA QVPQKTYHYY HPETKGLDFS ALMDDVKNAP
201: EGSFFLLHAC AHNPTGVDPT EEQWREISQL FKAKKHFAFF DMAYQGFASG DPARDAKSIR IFLEDGHHIG ISQSYAKNMG LYGQRVGCLS VLCEDPKQAV
301: AVKSQLQQLA RPMYSNPPLH GAQLVSTILE DPELKSLWLK EVKVMADRII GMRTTLRESL EKLGSPLSWE HVTKQIGMFC YSGLTPEQVD RLTSEYHIYM
401: TRNGRISMAG VTTGNVGYLA NAIHEVTKSS
Arabidopsis Description
ASP1Aspartate aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46643]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.