Factsheet for Os06t0548000-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

mitochondrion: 12746528
plasma membrane: 15069638
plastid: 17189339
mitochondrion: 19010998
mitochondrion: 23027867
plastid: 27992503

msms PMID: 23027867 doi

G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.

msms PMID: 12746528 doi

JL Heazlewood, KA Howell, J Whelan, AH Millar

Plant Molecular Biology Group, School of Biomedical and Chemical Sciences, The University of Western Australia, Crawley 6009, Australia.

msms PMID: 15069638 doi

N Tanaka, M Fujita, H Handa, S Murayama, M Uemura, Y Kawamura, T Mitsui, S Mikami, Y Tozawa, T Yoshinaga, S Komatsu

Department of Molecular Genetics, National Institute of Agrobiological Sciences, 305-8602, Tsukuba, Japan.

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G369300.1	Wheat	mitochondrion	85.31	92.72
TraesCS7B01G274100.1	Wheat	mitochondrion	85.1	92.49
TraesCS7A01G353500.1	Wheat	mitochondrion	84.88	92.25
Os02t0236000-01	Rice	mitochondrion	82.07	87.96
GSMUA_Achr6P14650_001	Banana	mitochondrion	79.91	86.25
VIT_12s0028g01820.t01	Wine grape	mitochondrion	77.11	84.4
PGSC0003DMT400052597	Potato	mitochondrion	75.81	82.59
Solyc07g055210.2.1	Tomato	extracellular, mitochondrion, plastid	75.59	82.35
Bra021682.1-P	Field mustard	mitochondrion	74.51	80.99
CDX97776	Canola	mitochondrion	74.73	80.65
CDY58981	Canola	mitochondrion	74.3	80.56
KRH55720	Soybean	mitochondrion	74.08	80.33
AT2G30970.1	Thale cress	mitochondrion	73.0	78.6
CDY10765	Canola	mitochondrion	71.92	78.54
Bra018286.1-P	Field mustard	mitochondrion	71.71	78.3
CDY52691	Canola	mitochondrion	66.95	76.35
HORVU7Hr1G089290.4	Barley	cytosol	81.86	71.78
Os01t0760600-01	Rice	plastid	43.41	43.7
Os02t0797500-01	Rice	plastid	41.25	41.7

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	EntrezGene:4341252	EMBL:AK101008	InterPro:Aminotransferase_I/II	InterPro:Asp_trans
ProteinID:BAF19739.1	ProteinID:BAS98162.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004069	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006520
GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422	InterPro:NHTrfase_class1_PyrdxlP-BS	EnsemblPlantsGene:Os06g0548000	EnsemblPlants:Os06t0548000-01
PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879	PANTHER:PTHR11879:SF18	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	UniProt:Q0DBN4	SUPFAM:SSF53383	UniParc:UPI0000E12846	RefSeq:XP_015640924.1
SEG:seg	:	:	:	:	:

Description

Aspartate aminotransferase (EC 2.6.1.1). (Os06t0548000-01)

Coordinates

chr6:-:20727293..20731768

Molecular Weight (calculated)

51323.8 Da

IEP (calculated)

8.387

GRAVY (calculated)

-0.280

Length

463 amino acids

Sequence
(BLAST)

001: MHTRSRRLGF PPLNPSHLLL TPHLPPLSSD RARMAMSRAA AAAAGTPVAR RRLMGAVAAR SMASWFGHVE PAAKDPILGV TEAFLADPSP DKVNVGVGAY
101: RDDSGKPVVL ECVREAERRI AGSMNMEYLP MGGSIKMIEE SLKLAYGENC EFIKDKRIAA VQALSGTGAC RLFADFQKRF LPDSQIYIPT PTWANHHNIW
201: RDAQVPQKTF TYYHPESRGL DFAGLMDDIK NAPDGSFFLL HACAHNPTGV DPSEEQWREI SHQFKVKKHF PFFDMAYQGF ASGDPERDAK AIRIFLEDGH
301: QIGCAQSYAK NMGLYGQRAG CLSILCDDEM QAVAVKSQLQ QIARPLYSNP PVHGALIVST ILGDPELKSL WLKEVKGMAD RIIGMRTALK ENLEKLGSPM
401: SWEHITNQIG MFCYSGMTPE QVDRLTKEFH IYMTRNGRIS MAGVTTGNVA YLANAIHEVT KTK

Best Arabidopsis Sequence Match ( AT2G30970.2 )
(BLAST)

001: MALAMMIRNA ASKRGMTPIS GHFGGLRSMS SWWKSVEPAP KDPILGVTEA FLADPSPEKV NVGVGAYRDD NGKPVVLECV REAEKRLAGS TFMEYLPMGG
101: SAKMVDLTLK LAYGDNSEFI KDKRIAAVQT LSGTGACRLF ADFQKRFSPG SQIYIPVPTW SNHHNIWKDA QVPQKTYHYY HPETKGLDFS ALMDDVKNAP
201: EGSFFLLHAC AHNPTGVDPT EEQWREISQL FKAKKHFAFF DMAYQGFASG DPARDAKSIR IFLEDGHHIG ISQSYAKNMG LYGQRVGCLS VLCEDPKQAV
301: AVKSQLQQLA RPMYSNPPLH GAQLVSTILE DPELKSLWLK EVKVMADRII GMRTTLRESL EKLGSPLSWE HVTKQIGMFC YSGLTPEQVD RLTSEYHIYM
401: TRNGRISMAG VTTGNVGYLA NAIHEVTKSS

Arabidopsis Description

ASP1Aspartate aminotransferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46643]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.