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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G305400.1 Wheat cytosol, peroxisome 79.3 94.06
Zm00001d043382_P001 Maize plasma membrane 92.59 92.59
TraesCS3B01G331100.1 Wheat golgi 87.15 88.11
Os01t0760600-01 Rice plastid 88.02 87.83
GSMUA_Achr4P08110_001 Banana cytosol 78.87 85.99
VIT_11s0016g03720.t01 Wine grape cytosol 76.47 85.4
PGSC0003DMT400040385 Potato cytosol 75.16 84.98
GSMUA_Achr7P25170_001 Banana cytosol, peroxisome, plastid 78.0 84.43
Solyc07g032740.2.1 Tomato plastid, unclear 65.36 84.03
HORVU3Hr1G073220.8 Barley mitochondrion, plastid 88.02 82.79
KRH62024 Soybean nucleus 74.51 82.21
VIT_04s0008g03770.t01 Wine grape cytosol 75.38 81.99
PGSC0003DMT400028106 Potato plastid 78.65 79.69
Solyc08g068330.2.1 Tomato plastid 78.43 79.65
CDX70399 Canola plastid 76.47 78.0
AT5G11520.1 Thale cress plastid 76.25 77.95
KRH52682 Soybean endoplasmic reticulum 77.34 77.85
Bra006103.1-P Field mustard plastid 76.47 77.65
CDX78428 Canola plastid 76.47 77.65
CDX91212 Canola plastid 45.1 67.43
KXG29888 Sorghum mitochondrion 45.53 48.6
KXG31276 Sorghum plastid 48.15 48.15
Protein Annotations
KEGG:00220+2.6.1.1KEGG:00250+2.6.1.1KEGG:00270+2.6.1.1KEGG:00330+2.6.1.1KEGG:00350+2.6.1.1KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1KEGG:00401+2.6.1.1KEGG:00710+2.6.1.1KEGG:00950+2.6.1.1KEGG:00960+2.6.1.1MapMan:25.1.7
Gene3D:3.40.640.10Gene3D:3.90.1150.10UniProt:A0A1B6Q670InterPro:Aminotransferase_I/IIInterPro:Asp_transGO:GO:0003674
GO:GO:0003824GO:GO:0004069GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005777GO:GO:0006520GO:GO:0007275GO:GO:0008150GO:GO:0008152
GO:GO:0008483GO:GO:0009058GO:GO:0009536GO:GO:0009987GO:GO:0010150GO:GO:0016020
GO:GO:0016740GO:GO:0030170GO:GO:0080130InterPro:IPR015421InterPro:IPR015422EnsemblPlants:KXG33419
ProteinID:KXG33419ProteinID:KXG33419.1InterPro:NHTrfase_class1_PyrdxlP-BSPFAM:PF00155PRINTS:PR00799ScanProsite:PS00105
PANTHER:PTHR11879PANTHER:PTHR11879:SF33MetaCyc:PWY-5913MetaCyc:PWY-6318MetaCyc:PWY-6638MetaCyc:PWY-6642
MetaCyc:PWY-6643MetaCyc:PWY-7115MetaCyc:PWY-7117MetaCyc:PWY-7383InterPro:PyrdxlP-dep_TrfaseInterPro:PyrdxlP-dep_Trfase_dom1
InterPro:PyrdxlP-dep_Trfase_majorEnsemblPlantsGene:SORBI_3003G303300SUPFAM:SSF53383UniParc:UPI0001FCD529SEG:seg:
Description
hypothetical protein
Coordinates
chr3:-:63378671..63384079
Molecular Weight (calculated)
50103.3 Da
IEP (calculated)
8.930
GRAVY (calculated)
-0.110
Length
459 amino acids
Sequence
(BLAST)
001: MAPANVRAAQ APSADRRLST LVRHLLPSSP RRTAAEAAAD ASATLESFPT MASQGSSVFA ALAQAPEDPI LGVTVAYNKD PSPVKVNLGV GAYRTEEGKP
101: LVLNVVRRAE QMLINNPSRV KEYLPITGLA EFNKLSAKLI FGADSPAIQE NRVATVQCLS GTGSLRVGGE FLARHYHERT IYIPQPTWGN HPKVFTLSGL
201: TVRSYRYYDP ATRGLDFKGL LEDLSSAPSG SIVLLHACAH NPTGVDPTLD QWEQIRQLMR SKSLLPFFDS AYQGFASGSL DKDAQSVRMF VADGGELLMA
301: QSYAKNMGLY GERVGALSIV CGSADVAVRV ESQLKLVIRP MYSNPPLHGA SIVATILRDS EMYNEWTLEL KAMADRIISM RQQLFDALKS RGTPGDWSHI
401: IKQIGMFTFT GLNSEQVAFM RQEYHIYMTS DGRISMAGLS MRTVPHLADA IHAAVTQLK
Best Arabidopsis Sequence Match ( AT5G11520.1 )
(BLAST)
001: MKTTHFSSSS SSDRRIGALL RHLNSGSDSD NLSSLYASPT SGGTGGSVFS HLVQAPEDPI LGVTVAYNKD PSPVKLNLGV GAYRTEEGKP LVLNVVRKAE
101: QQLINDRTRI KEYLPIVGLV EFNKLSAKLI LGADSPAIRE NRITTVECLS GTGSLRVGGE FLAKHYHQKT IYITQPTWGN HPKIFTLAGL TVKTYRYYDP
201: ATRGLNFQGL LEDLGAAAPG SIVLLHACAH NPTGVDPTIQ QWEQIRKLMR SKGLMPFFDS AYQGFASGSL DTDAKPIRMF VADGGECLVA QSYAKNMGLY
301: GERVGALSIV CKSADVAGRV ESQLKLVIRP MYSSPPIHGA SIVAVILRDK NLFNEWTLEL KAMADRIISM RKQLFEALRT RGTPGDWSHI IKQIGMFTFT
401: GLNPAQVSFM TKEYHIYMTS DGRISMAGLS SKTVPHLADA IHAVVTKAV
Arabidopsis Description
ASP3Aspartate aminotransferase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P46644]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.