Factsheet for TraesCS6A01G360700.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi, unclear, plastid

Predictor Summary:

plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plastid, unclear
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G344200.1	Wheat	plastid	88.25	90.57
TraesCS6B01G393600.1	Wheat	golgi	87.82	90.33
Os02t0797500-01	Rice	plastid	81.62	83.41
KXG31276	Sorghum	plastid	81.41	83.01
Zm00001d018386_P005	Maize	plastid	82.69	82.34
HORVU0Hr1G017370.1	Barley	plastid	87.18	78.46
Bra023969.1-P	Field mustard	plastid	74.36	76.82
CDY13467	Canola	plastid	74.36	76.65
GSMUA_Achr6P30270_001	Banana	plastid	74.79	76.25
KRH05255	Soybean	plastid	75.21	76.03
AT4G31990.3	Thale cress	plastid	74.79	75.76
KRH15792	Soybean	plastid	74.79	75.59
CDX72339	Canola	plastid	74.15	75.27
PGSC0003DMT400076866	Potato	cytosol, plastid	73.72	74.68
Solyc08g041870.2.1	Tomato	plastid	72.65	73.59
VIT_04s0008g06040.t01	Wine grape	cytosol, peroxisome, plastid	75.43	67.88
CDX68807	Canola	plastid	74.15	67.64
CDX72238	Canola	mitochondrion	26.28	58.57
TraesCS3A01G305400.1	Wheat	cytosol, peroxisome	43.8	52.97
TraesCS7A01G353500.1	Wheat	mitochondrion	41.45	45.54
TraesCS6A01G018600.1	Wheat	golgi, mitochondrion	41.03	45.07

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	InterPro:Asp_trans	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	InterPro:IPR015421	InterPro:IPR015422
InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879	PANTHER:PTHR11879:SF1
InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	EnsemblPlantsGene:TraesCS6A01G360700	EnsemblPlants:TraesCS6A01G360700.2
TIGR:cd00609	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:+:591466832..591470011

Molecular Weight (calculated)

51978.3 Da

IEP (calculated)

7.265

GRAVY (calculated)

-0.213

Length

468 amino acids

Sequence
(BLAST)

001: MPQAFRTILS HAESYLGCWC LLGFRLRMTP IRTFPSNSIF QRPFSSASRD RVNTSHITMA VAVDASRFEG VPMAPPDPIL GVSEAFKADT SDLKLNLGVG
101: AYRTEELQPA VLNVVKKAEK LMLEKGENKE YLPIEGFAAF NKATADLLLG ADNPVIKQGR VATLQSLSGT GSLRLAAAFI QRYFPDAKVL ISSPTWGNHK
201: NIFNDARVPW SEYRYYDPRT VGLDFEGMIA DIQAAPEGSF VLLHGCAHNP TGIDPTPEQW EKLADVIEEK KHMPFFDVAY QGFASGSLDE DASSVRLFVK
301: RGLEVFVAQS YSKNLGLYAE RIGAINVICS APEVADRVKS QLKRLARPMY SNPPIHGAKI VANVVGDPTM FGEWKEEMEQ MAGRIKNVRQ KLYDSLTAKD
401: QSGKDWSFIL SQIGMFSFTG LNRPQSDNMT DKWHIYMTKD GRISLAGLNL AKCEYLADAI IDSFHNVN

Best Arabidopsis Sequence Match ( AT4G31990.1 )
(BLAST)

001: MASLMLSLGS TSLLPREINK DKLKLGTSAS NPFLKAKSFS RVTMTVAVKP SRFEGITMAP PDPILGVSEA FKADTNGMKL NLGVGAYRTE ELQPYVLNVV
101: KKAENLMLER GDNKEYLPIE GLAAFNKATA ELLFGAGHPV IKEQRVATIQ GLSGTGSLRL AAALIERYFP GAKVVISSPT WGNHKNIFND AKVPWSEYRY
201: YDPKTIGLDF EGMIADIKEA PEGSFILLHG CAHNPTGIDP TPEQWVKIAD VIQEKNHIPF FDVAYQGFAS GSLDEDAASV RLFAERGMEF FVAQSYSKNL
301: GLYAERIGAI NVVCSSADAA TRVKSQLKRI ARPMYSNPPV HGARIVANVV GDVTMFSEWK AEMEMMAGRI KTVRQELYDS LVSKDKSGKD WSFILKQIGM
401: FSFTGLNKAQ SDNMTDKWHV YMTKDGRISL AGLSLAKCEY LADAIIDSYH NVS

Arabidopsis Description

ASP5Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:B9DG21]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.