Factsheet for GSMUA_Achr6P30270_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P16540_001	Banana	cytosol, peroxisome, plastid	49.02	83.64
KXG31276	Sorghum	plastid	79.96	79.96
Bra023969.1-P	Field mustard	plastid	78.65	79.69
CDY13467	Canola	plastid	78.65	79.52
Os02t0797500-01	Rice	plastid	78.87	79.04
AT4G31990.3	Thale cress	plastid	79.52	79.0
PGSC0003DMT400076866	Potato	cytosol, plastid	78.65	78.14
CDX72339	Canola	plastid	78.43	78.09
TraesCS6D01G344200.1	Wheat	plastid	77.12	77.63
TraesCS6B01G393600.1	Wheat	golgi	76.69	77.36
Solyc08g041870.2.1	Tomato	plastid	77.78	77.27
Zm00001d018386_P005	Maize	plastid	78.43	76.6
KRH05255	Soybean	plastid	76.03	75.38
KRH15792	Soybean	plastid	75.82	75.16
TraesCS6A01G360700.2	Wheat	golgi, plastid, unclear	76.25	74.79
VIT_04s0008g06040.t01	Wine grape	cytosol, peroxisome, plastid	80.39	70.96
CDX68807	Canola	plastid	79.08	70.76
HORVU0Hr1G017370.1	Barley	plastid	75.82	66.92
CDX72238	Canola	mitochondrion	27.89	60.95
GSMUA_Achr4P08110_001	Banana	cytosol	48.8	53.21
GSMUA_Achr7P25170_001	Banana	cytosol, peroxisome, plastid	47.49	51.42
GSMUA_Achr6P14650_001	Banana	mitochondrion	43.36	46.39

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	InterPro:Asp_trans	GO:GO:0003674	GO:GO:0003824
GO:GO:0004069	GO:GO:0005488	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483
GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	GO:GO:0080130	EnsemblPlantsGene:GSMUA_Achr6G30270_001
EnsemblPlants:GSMUA_Achr6P30270_001	EnsemblPlants:GSMUA_Achr6T30270_001	InterPro:IPR015421	InterPro:IPR015422	UniProt:M0TBH2	InterPro:NHTrfase_class1_PyrdxlP-BS
PFAM:PF00155	PRINTS:PR00799	ScanProsite:PS00105	PANTHER:PTHR11879	PANTHER:PTHR11879:SF1	InterPro:PyrdxlP-dep_Trfase
InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383	UniParc:UPI0002961D8C	SEG:seg	:

Description

Aspartate aminotransferase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr6G30270_001]

Coordinates

chr6:-:30302300..30309863

Molecular Weight (calculated)

50909.9 Da

IEP (calculated)

8.657

GRAVY (calculated)

-0.238

Length

459 amino acids

Sequence
(BLAST)

001: MASALASVAL SAPFFRAVPL PENSMFQRIG AEKKHGNPLL KGKDFRRVSM TVSVNVSRFE GVTMAPPDPI LGVSEAFRAD TNDLKLNLGV GAYRTEELQP
101: YVLNVVKKAE KLMLERGENK EYLPIEGLAA FNKVTAELLF GADNSVIQEG RVATIQGLSG TGSLRLAAAF IQRYFPDAKA LISSPTWGNH KNIFNDARVP
201: WSEYRYYDPR TVGLDFDGMV ADIKAAPDGS FVLLHGCAHN PTGIDPTPEQ WEKIADVIQE KNHIPFFDVA YQGFASGSLD ADAYSVRLFV KRGFELLVAQ
301: SYSKNLGLYA ERIGAINVVC SSSDAGTRVK SQLKRLARPM YSNPPVHGAR IVANVVGDPN LFNEWKQEME LMAGRIKNVR QRLYENLSQK DKSGKDWSFV
401: LKQIGMFSYT GLHKAQSDHM TDKWHIYMTK DGRISLAGLS LSKCEYLADA IIDSFHNVD

Best Arabidopsis Sequence Match ( AT4G31990.1 )
(BLAST)

001: MASLMLSLGS TSLLPREINK DKLKLGTSAS NPFLKAKSFS RVTMTVAVKP SRFEGITMAP PDPILGVSEA FKADTNGMKL NLGVGAYRTE ELQPYVLNVV
101: KKAENLMLER GDNKEYLPIE GLAAFNKATA ELLFGAGHPV IKEQRVATIQ GLSGTGSLRL AAALIERYFP GAKVVISSPT WGNHKNIFND AKVPWSEYRY
201: YDPKTIGLDF EGMIADIKEA PEGSFILLHG CAHNPTGIDP TPEQWVKIAD VIQEKNHIPF FDVAYQGFAS GSLDEDAASV RLFAERGMEF FVAQSYSKNL
301: GLYAERIGAI NVVCSSADAA TRVKSQLKRI ARPMYSNPPV HGARIVANVV GDVTMFSEWK AEMEMMAGRI KTVRQELYDS LVSKDKSGKD WSFILKQIGM
401: FSFTGLNKAQ SDNMTDKWHV YMTKDGRISL AGLSLAKCEY LADAIIDSYH NVS

Arabidopsis Description

ASP5Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:B9DG21]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.