Factsheet for GSMUA_Achr5P16540_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 1
mitochondrion 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P30270_001	Banana	plastid	83.64	49.02
PGSC0003DMT400076866	Potato	cytosol, plastid	74.35	43.29
Bra023969.1-P	Field mustard	plastid	72.86	43.27
CDY13467	Canola	plastid	72.86	43.17
Solyc08g041870.2.1	Tomato	plastid	73.61	42.86
AT4G31990.3	Thale cress	plastid	73.23	42.64
CDX72339	Canola	plastid	72.86	42.52
KRH05255	Soybean	plastid	72.12	41.9
KRH15792	Soybean	plastid	72.12	41.9
VIT_04s0008g06040.t01	Wine grape	cytosol, peroxisome, plastid	77.32	40.0
CDX68807	Canola	plastid	72.49	38.01
GSMUA_Achr4P08110_001	Banana	cytosol	50.93	32.54
GSMUA_Achr7P25170_001	Banana	cytosol, peroxisome, plastid	49.81	31.6
GSMUA_Achr6P14650_001	Banana	mitochondrion	45.35	28.44
CDX72238	Canola	mitochondrion	20.82	26.67

Protein Annotations

KEGG:00220+2.6.1.1	KEGG:00250+2.6.1.1	KEGG:00270+2.6.1.1	KEGG:00330+2.6.1.1	KEGG:00350+2.6.1.1	KEGG:00360+2.6.1.1
KEGG:00400+2.6.1.1	KEGG:00401+2.6.1.1	KEGG:00710+2.6.1.1	KEGG:00950+2.6.1.1	KEGG:00960+2.6.1.1	MapMan:25.1.7
Gene3D:3.40.640.10	Gene3D:3.90.1150.10	InterPro:Aminotransferase_I/II	InterPro:Asp_trans	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0008483	GO:GO:0009058
GO:GO:0009987	GO:GO:0016740	GO:GO:0030170	EnsemblPlantsGene:GSMUA_Achr5G16540_001	EnsemblPlants:GSMUA_Achr5P16540_001	EnsemblPlants:GSMUA_Achr5T16540_001
InterPro:IPR015421	InterPro:IPR015422	UniProt:M0SZ33	InterPro:NHTrfase_class1_PyrdxlP-BS	PFAM:PF00155	ScanProsite:PS00105
PANTHER:PTHR11879	PANTHER:PTHR11879:SF1	InterPro:PyrdxlP-dep_Trfase	InterPro:PyrdxlP-dep_Trfase_dom1	InterPro:PyrdxlP-dep_Trfase_major	SUPFAM:SSF53383
UniParc:UPI0002950C05	:	:	:	:	:

Description

Aspartate aminotransferase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr5G16540_001]

Coordinates

chr5:+:15057674..15059881

Molecular Weight (calculated)

29955.9 Da

IEP (calculated)

9.597

GRAVY (calculated)

-0.227

Length

269 amino acids

Sequence
(BLAST)

001: MLERGENKEY LPVEGLAAFN KVTADLLFGV DNRVIQEGRV ATVQGLSGTG SLHLAAAFIQ TYFPDAKSLI SSPTWGNHKN IFNDARVPWS EYRYFDPRTV
101: VLDFDGMIAN IKTPNGSFIL LHGCGFASGS LDADAYSISL FVDRGLELLV AQSYSKKLGL YAERIGAINV VCLSSDAAAR VKIQLKRLAR PMYSNPPVHG
201: ARIVANIARD PNLFDERKQE MELMAGRIKN VRRRLHENLS QKDKRRSDWS YILKQIGTSS YTGLNEAQV

Best Arabidopsis Sequence Match ( AT4G31990.1 )
(BLAST)

001: MASLMLSLGS TSLLPREINK DKLKLGTSAS NPFLKAKSFS RVTMTVAVKP SRFEGITMAP PDPILGVSEA FKADTNGMKL NLGVGAYRTE ELQPYVLNVV
101: KKAENLMLER GDNKEYLPIE GLAAFNKATA ELLFGAGHPV IKEQRVATIQ GLSGTGSLRL AAALIERYFP GAKVVISSPT WGNHKNIFND AKVPWSEYRY
201: YDPKTIGLDF EGMIADIKEA PEGSFILLHG CAHNPTGIDP TPEQWVKIAD VIQEKNHIPF FDVAYQGFAS GSLDEDAASV RLFAERGMEF FVAQSYSKNL
301: GLYAERIGAI NVVCSSADAA TRVKSQLKRI ARPMYSNPPV HGARIVANVV GDVTMFSEWK AEMEMMAGRI KTVRQELYDS LVSKDKSGKD WSFILKQIGM
401: FSFTGLNKAQ SDNMTDKWHV YMTKDGRISL AGLSLAKCEY LADAIIDSYH NVS

Arabidopsis Description

ASP5Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:B9DG21]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.