Factsheet for PGSC0003DMT400017886

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1
plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400089805	Potato	cytosol	20.83	83.92
Solyc02g067660.2.1	Tomato	plastid	79.17	80.42
PGSC0003DMT400054651	Potato	extracellular, nucleus, peroxisome	43.58	43.58
VIT_05s0077g01750.t01	Wine grape	extracellular, plasma membrane	40.62	41.64
VIT_05s0077g01720.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	40.8	41.59
KRH18587	Soybean	endoplasmic reticulum, nucleus	39.93	39.52
VIT_14s0066g01810.t01	Wine grape	cytosol	40.8	39.04
VIT_14s0066g01820.t01	Wine grape	cytosol	33.51	38.6
KRH18578	Soybean	cytosol	24.83	38.24
KRG93399	Soybean	plastid	38.89	38.16
KRG93398	Soybean	cytosol	11.28	37.79
CDY09901	Canola	cytosol, endoplasmic reticulum, nucleus	23.78	35.68
Bra006274.1-P	Field mustard	nucleus	30.9	35.53
CDX70582	Canola	cytosol	31.94	35.45
CDX78601	Canola	nucleus	30.73	35.26
VIT_14s0066g01840.t01	Wine grape	mitochondrion	20.31	35.24
CDY09899	Canola	extracellular, vacuole	32.29	34.32
AT5G14930.2	Thale cress	cytosol, nucleus, plastid	31.94	34.26
CDX70584	Canola	cytosol	31.08	34.03
KRH18585	Soybean	mitochondrion	31.08	33.65
Bra008729.1-P	Field mustard	cytosol	30.56	33.46
CDX78600	Canola	extracellular	30.73	33.15
CDY69990	Canola	endoplasmic reticulum	32.47	32.98
CDX70581	Canola	cytosol	29.51	32.32
Bra008731.1-P	Field mustard	extracellular, plasma membrane, vacuole	32.29	26.12
PGSC0003DMT400051170	Potato	cytosol	22.92	22.84
VIT_05s0077g01730.t01	Wine grape	cytosol	38.19	21.09
VIT_14s0066g01830.t01	Wine grape	mitochondrion	40.8	20.33
PGSC0003DMT400083030	Potato	cytosol	16.84	16.58

Protein Annotations

EnsemblPlants:PGSC0003DMT400017886	EnsemblPlantsGene:PGSC0003DMG400006945	EntrezGene:102585975	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:Fungal_lipase-like
InterPro:IPR029058	ncoils:Coil	PANTHER:PTHR21493	PANTHER:PTHR21493:SF238	PFAM:PF01764	PGSC:PGSC0003DMG400006945
RefSeq:XP_015168785.1	SUPFAM:SSF53474	UniParc:UPI000296EFD3	UniProt:M1A9N9	MapMan:26.8.2.4.3	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400006945]

Coordinates

chr2:-:26261505..26264738

Molecular Weight (calculated)

66174.6 Da

IEP (calculated)

7.080

GRAVY (calculated)

-0.445

Length

576 amino acids

Sequence
(BLAST)

001: MSNSPKAKMS QVSMFSSGQE FANLLVSSDL LLHSWFTISD LRNHPYLNNP ILVKVYPYHS NGAIVAFVSS PTCTLQKEMV SSEDLEGSQS PFDFISTKFN
101: PHFSVNKAAI TLFESLLNEL SALKEQLGNV SPLIITGVSL GGSVASLFTL WLLKDNNKRP TCITFGSPLL GDSGRQQAIS ERPSWNSSFL HVVSNHDPIL
201: RSLISPTNAF AGSIPQSCIY NPFGMFLLCS DSDCSCFEEP ESVLDIMMEM NLNSQHQDNR FLAFDYEQVL ELLKHRVIFK GTSQLFHYSV DQLQAGIDLQ
301: LEAIGIGGQQ SSNMNPLRTE VKQRVKESFD KKKDAFDPGK KLNKMKEAMA WLEWYKKVTL KEGGYYDSFK RSEYRGRDAV KSRQEIVKHQ RILTRYWKTM
401: VAEVEKMPQR EETAFRTRWL YAGTNYRRMV EPLDIAEYYM KSGNTDYVNL GRSEHYKKLE EWRKEDNPSG SGNYRRKSVS LTEDSCFWAY VEEAIINSKR
501: LREGSLEEKE NAMAYLVKFG GNVMTMIWSY SVSSEIFQPQ SSFMNWWQEY RQDILRCLSN FPLANYMDNE VYRSYA

Best Arabidopsis Sequence Match ( AT5G14930.2 )
(BLAST)

001: MESSSSLKGS ALGKLVVTSG LLHSSWSKIL EIHNPPYSNH DPGLQVSKKK KDSGLEFQIH REEKFTLVVF SAPPICRSSS SDSTLLHVKD KENPFPFLCS
101: ENNPSFSLHT PAFNLFTSAS TSLTYLKSEL LQTLKSEKPV IITGAALGGS VASLYTLWLL ETIEPTLKRP LCITFGSPLI GDASLQQILE NSVRNSCFLH
201: VVSAQTRIKM DFFKPFGTFL ICFDSGCVCI EDHVAVTELL NGVHDSGLVD YSQVLNRLDQ SMLSLADSRL IPEDVIKGIE KRAEMKNLRF DMMFKKLNDM
301: KISMAYIEWY KKKCKEVKIG YYDRFKTQLA FPSKEFDINI KNHHKSELNR FWKSVVEEVE RRPQSDASIL KRRFLFSGNN YRRMIEPLDI AEYYLEGRKE
401: YRTTGRSHHY VMLEKWFGME SILIEKERCK KRDLSDLLTF DSCFWAEVED SLIVINQLNT TVGMRDDVRE VLTRKLVEFE GYVWEIITKR EVSPEIFLEE
501: SSFMKWWKEY KKIKGFNSSY LTEFMNTRKY ESYGKSQ

Arabidopsis Description

SAG101Senescence-associated carboxylesterase 101 [Source:UniProtKB/Swiss-Prot;Acc:Q4F883]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.