Factsheet for PGSC0003DMT400083030

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400051170
PGSC0003DMT400083030

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48090.1	PGSC0003DMT400083030	AT3G48090.1	11574472
AT3G48090.1	PGSC0003DMT400051170	AT3G52430.1	11574472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g071280.2.1	Tomato	cytosol	89.4	86.88
VIT_17s0000g07560.t01	Wine grape	cytosol	52.65	51.68
KRH63455	Soybean	cytosol	50.43	48.2
KRH54464	Soybean	cytosol, endoplasmic reticulum	50.43	47.58
KRH54468	Soybean	cytosol	48.89	46.35
KRH54465	Soybean	cytosol	48.21	45.85
VIT_17s0000g07370.t01	Wine grape	cytosol	45.98	44.83
VIT_17s0000g07420.t01	Wine grape	cytosol	46.5	42.7
GSMUA_Achr8P25290_001	Banana	plastid	46.67	42.46
Bra033774.1-P	Field mustard	cytosol	41.03	40.54
CDX83034	Canola	cytosol, extracellular, plastid	36.41	40.49
TraesCS5B01G200800.2	Wheat	cytosol, nucleus, peroxisome, plastid	40.34	40.27
TraesCS5A01G202200.2	Wheat	cytosol, nucleus, peroxisome, plastid	42.91	40.22
TraesCS5D01G208600.1	Wheat	plastid	42.73	40.13
CDX68479	Canola	cytosol, extracellular, plastid	35.56	39.54
KXG35573	Sorghum	cytosol, nucleus, peroxisome	41.2	39.38
Os09t0392100-01	Rice	cytosol, nucleus, peroxisome, plastid	41.37	38.97
CDY44979	Canola	cytosol	39.83	38.83
AT3G48090.1	Thale cress	cytosol	41.2	38.68
Zm00001d005708_P001	Maize	cytosol, nucleus, peroxisome, plastid	40.68	38.45
HORVU5Hr1G060060.2	Barley	plastid	43.08	38.07
Bra018085.1-P	Field mustard	cytosol	38.97	38.0
CDY68128	Canola	cytosol	38.8	37.83
Bra033775.1-P	Field mustard	cytosol	38.29	37.33
AT3G48080.1	Thale cress	cytosol	39.66	36.88
CDX83035	Canola	cytosol	35.73	36.03
CDX68481	Canola	cytosol	29.57	34.26
VIT_17s0000g07400.t01	Wine grape	plastid	34.02	29.7
PGSC0003DMT400051170	Potato	cytosol	25.13	25.43
PGSC0003DMT400089805	Potato	cytosol	5.47	22.38
PGSC0003DMT400054651	Potato	extracellular, nucleus, peroxisome	18.12	18.4
PGSC0003DMT400017886	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	16.58	16.84

Protein Annotations

EntrezGene:102597661	EntrezGene:102598075	MapMan:26.8.2.4.1	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	ncoils:Coil
InterPro:Fungal_lipase-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	InterPro:IPR029058	UniProt:M1D6D0	PFAM:PF01764	EnsemblPlantsGene:PGSC0003DMG400033029	PGSC:PGSC0003DMG400033029
EnsemblPlants:PGSC0003DMT400083030	PANTHER:PTHR21493	PANTHER:PTHR21493:SF94	SUPFAM:SSF53474	UniParc:UPI00029483F5	RefSeq:XP_006354815.1
SEG:seg	:	:	:	:	:

Description

Enhanced disease susceptibility 1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400033029]

Coordinates

chr6:-:52121192..52125048

Molecular Weight (calculated)

66976.9 Da

IEP (calculated)

7.908

GRAVY (calculated)

-0.352

Length

585 amino acids

Sequence
(BLAST)

001: MEAHKLSPGI PYIYKKIDRS TDVVFAFAGT LSFDGWYSNT SFGETEINTT LFPSLRSVGT DEVAKVNEAF ARRFQDILDK SSLKKEVETA MSKGRQVVFA
101: GHSSGGAIAI LAALWCLECC RTRPEGDMLV HLYCMTFGSP LVGNKIWSHA LRRENWARYF IHFVMKYDIV PRMMLAPLSS IQELLQAISP FINPKSQYSQ
201: RDAVARSSNA LNFFMTVMRN ASSVASYAAC NLKGCTNLLL ETVSNIVQLS PYRPFGTYIF CTGNRKLVVV ENPDAVLQLL FYSSQLSSEA EAAVVGARSL
301: NDHLLYKNEM QDSLEMQDVV HLNNLTDIPL SSNVDLRGEV ASMNSALNDL GLSTRARLCL RAAGEWEKQK KKNEEKIEQN KSSIRDALSK IQEYQTKCDI
401: RKVGYYDAFK IQNTEDDFKA NVKRLELAGI WDEIIEMLKR YELPDSFEGR RDWIELGTQF RRQVEPLDIA NYYRHLKNED TGPYLIRARP KRYRFTQRWL
501: EHFDKVQAGA RSESCFWAEV EELRNKLFAQ VQDRVLSLET AANIWIQSSL LGDDVFFPES TYTKWWKTLP PQHKQTSWVS EKITP

Best Arabidopsis Sequence Match ( AT3G48090.1 )
(BLAST)

001: MAFEALTGIN GDLITRSWSA SKQAYLTERY HKEEAGAVVI FAFQPSFSEK DFFDPDNKSS FGEIKLNRVQ FPCMRKIGKG DVATVNEAFL KNLEAIIDPR
101: TSFQASVEMA VRSRKQIVFT GHSSGGATAI LATVWYLEKY FIRNPNVYLE PRCVTFGAPL VGDSIFSHAL GREKWSRFFV NFVSRFDIVP RIMLARKASV
201: EETLPHVLAQ LDPRKSSVQE SEQRITEFYT RVMRDTSTVA NQAVCELTGS AEAFLETLSS FLELSPYRPA GTFVFSTEKR LVAVNNSDAI LQMLFYTSQA
301: SDEQEWSLIP FRSIRDHHSY EELVQSMGKK LFNHLDGENS IESTLNDLGV STRGRQYVQA ALEEEKKRVE NQKKIIQVIE QERFLKKLAW IEDEYKPKCQ
401: AHKNGYYDSF KVSNEENDFK ANVKRAELAG VFDEVLGLMK KCQLPDEFEG DIDWIKLATR YRRLVEPLDI ANYHRHLKNE DTGPYMKRGR PTRYIYAQRG
501: YEHYILKPNG MIAEDVFWNK VNGLNLGLQL EEIQETLKNS GSECGSCFWA EVEELKGKPY EEVEVRVKTL EGMLGEWITD GEVDDKEIFL EGSTFRKWWI
601: TLPKNHKSHS PLRDYMMDEI TDT

Arabidopsis Description

EDS1Protein EDS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU72]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.