Factsheet for VIT_17s0000g07420.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_07s0031g02390.t01
VIT_17s0000g07370.t01
VIT_17s0000g07400.t01
VIT_17s0000g07420.t01
VIT_17s0000g07560.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48090.1	VIT_17s0000g07370.t01	AT3G48090.1	11574472
AT3G48090.1	VIT_17s0000g07400.t01	AT3G48090.1	11574472
AT3G48090.1	VIT_17s0000g07420.t01	AT3G48090.1	11574472
AT3G48090.1	VIT_17s0000g07560.t01	AT3G48090.1	11574472
AT3G48090.1	VIT_07s0031g02390.t01	AT3G52430.1	11574472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g07370.t01	Wine grape	cytosol	78.18	83.0
VIT_17s0000g07560.t01	Wine grape	cytosol	60.6	64.77
VIT_17s0000g07400.t01	Wine grape	plastid	51.65	49.1
KRH63455	Soybean	cytosol	44.74	46.57
PGSC0003DMT400083030	Potato	cytosol	42.7	46.5
KRH54468	Soybean	cytosol	43.49	44.89
KRH54465	Soybean	cytosol	43.33	44.88
Solyc06g071280.2.1	Tomato	cytosol	42.23	44.68
KRH54464	Soybean	cytosol, endoplasmic reticulum	41.13	42.26
GSMUA_Achr8P25290_001	Banana	plastid	38.93	38.57
CDX83034	Canola	cytosol, extracellular, plastid	30.3	36.69
KXG35573	Sorghum	cytosol, nucleus, peroxisome	35.16	36.6
CDX68479	Canola	cytosol, extracellular, plastid	29.98	36.31
TraesCS5D01G208600.1	Wheat	plastid	35.32	36.12
Os09t0392100-01	Rice	cytosol, nucleus, peroxisome, plastid	35.16	36.07
TraesCS5A01G202200.2	Wheat	cytosol, nucleus, peroxisome, plastid	35.32	36.06
Zm00001d005708_P001	Maize	cytosol, nucleus, peroxisome, plastid	34.85	35.86
Bra033774.1-P	Field mustard	cytosol	33.28	35.81
TraesCS5B01G200800.2	Wheat	cytosol, nucleus, peroxisome, plastid	32.65	35.49
Bra033775.1-P	Field mustard	cytosol	32.81	34.83
HORVU5Hr1G060060.2	Barley	plastid	35.64	34.29
AT3G48090.1	Thale cress	cytosol	33.44	34.19
AT3G48080.1	Thale cress	cytosol	33.59	34.02
CDY68128	Canola	cytosol	32.03	34.0
CDY44979	Canola	cytosol	32.03	34.0
Bra018085.1-P	Field mustard	cytosol	31.87	33.83
CDX83035	Canola	cytosol	30.3	33.28
CDX68481	Canola	cytosol	24.18	30.5
VIT_14s0066g01820.t01	Wine grape	cytosol	19.0	24.2
VIT_05s0077g01720.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, peroxisome, plasma membrane, vacuole	20.25	22.83
VIT_05s0077g01750.t01	Wine grape	extracellular, plasma membrane	19.94	22.6
VIT_07s0031g02390.t01	Wine grape	cytosol	21.82	22.46
VIT_14s0066g01810.t01	Wine grape	cytosol	20.09	21.26
VIT_14s0066g01840.t01	Wine grape	mitochondrion	10.99	21.08
VIT_05s0077g01730.t01	Wine grape	cytosol	20.72	12.66
VIT_14s0066g01830.t01	Wine grape	mitochondrion	19.94	10.99

Protein Annotations

EntrezGene:100250236	wikigene:100250236	MapMan:26.8.2.4.1	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	ProteinID:CBI15111
ProteinID:CBI15111.3	ncoils:Coil	UniProt:D7SI01	EMBL:FN594950	InterPro:Fungal_lipase-like	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:IPR029058
EntrezGene:LOC100250236	wikigene:LOC100250236	PFAM:PF01764	PANTHER:PTHR21493	PANTHER:PTHR21493:SF94	SUPFAM:SSF53474
UniParc:UPI0001BE0AD9	ArrayExpress:VIT_17s0000g07420	EnsemblPlantsGene:VIT_17s0000g07420	EnsemblPlants:VIT_17s0000g07420.t01	unigene:Vvi.8605	RefSeq:XP_002283967
RefSeq:XP_002283967.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr17:+:8367185..8369444

Molecular Weight (calculated)

72188.4 Da

IEP (calculated)

8.377

GRAVY (calculated)

-0.422

Length

637 amino acids

Sequence
(BLAST)

001: MANKPLTLLP TGYKSSCSVT ASNHTQREKI CTENMGETLG DRIGLSDEVI NAAASLAMKA HDCTGKPFLR KKGLPVTVFA FAGSWLPDDW CAQPPFGETK
101: MDTSNFPSLK SLGDDGVALV NGSFLRRFNA IQSSLAKKVK KVIGEKKQVV FTGYSSGAPV AILATLYLLE KSEPNQSPPR CVTFGSPLVG DRIFCHAVRR
201: EKWSDHFIHF VMRYDVIPRI MLGPSSTEHK QILDLFNPGS ESFRKHTDSS LGLYSSVMRN ASMVANYDAC NFMGCKIPAL ETLRNFIELS PYRPFGTYIF
301: FSGSGKPVVV RNPNAVLQML FYYAQWSQEE DAEAAKKGLN EHLAYQLKKL QSLGKQNVVY LDHLEELPVS SDGSPATVNT TLNDLGLSTQ AMLCLQATGE
401: LEKRKSRNQD KIINDYKQKI EGELRKLSKY KEKAETCGLG YYDSFKLQEK EDDFQANVSR LVLAGYWDEM MEMLKAYELP DEFEKSHDFI RLGTDYRRTV
501: EPLDIANFYR HAKDEETGFY VNKGTRPKRY RYIQNWLEHA EKKPSGSRSE SCFWAEVEDL RIKTRSNGSS PEIKQKVQQL GQNLIKWIDD ESLGKDVLLE
601: NSTFVKWWKP LPPEPLFTSK MIFFLSVCKI LFPVLNM

Best Arabidopsis Sequence Match ( AT3G48090.1 )
(BLAST)

001: MAFEALTGIN GDLITRSWSA SKQAYLTERY HKEEAGAVVI FAFQPSFSEK DFFDPDNKSS FGEIKLNRVQ FPCMRKIGKG DVATVNEAFL KNLEAIIDPR
101: TSFQASVEMA VRSRKQIVFT GHSSGGATAI LATVWYLEKY FIRNPNVYLE PRCVTFGAPL VGDSIFSHAL GREKWSRFFV NFVSRFDIVP RIMLARKASV
201: EETLPHVLAQ LDPRKSSVQE SEQRITEFYT RVMRDTSTVA NQAVCELTGS AEAFLETLSS FLELSPYRPA GTFVFSTEKR LVAVNNSDAI LQMLFYTSQA
301: SDEQEWSLIP FRSIRDHHSY EELVQSMGKK LFNHLDGENS IESTLNDLGV STRGRQYVQA ALEEEKKRVE NQKKIIQVIE QERFLKKLAW IEDEYKPKCQ
401: AHKNGYYDSF KVSNEENDFK ANVKRAELAG VFDEVLGLMK KCQLPDEFEG DIDWIKLATR YRRLVEPLDI ANYHRHLKNE DTGPYMKRGR PTRYIYAQRG
501: YEHYILKPNG MIAEDVFWNK VNGLNLGLQL EEIQETLKNS GSECGSCFWA EVEELKGKPY EEVEVRVKTL EGMLGEWITD GEVDDKEIFL EGSTFRKWWI
601: TLPKNHKSHS PLRDYMMDEI TDT

Arabidopsis Description

EDS1Protein EDS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU72]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.