Factsheet for Zm00001d005708_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
plastid 2
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d004706_P002
Zm00001d005708_P001
Zm00001d053138_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48090.1	Zm00001d005708_P001	AT3G48090.1	11574472
AT3G48090.1	Zm00001d004706_P002	AT3G52430.1	11574472
AT3G48090.1	Zm00001d053138_P002	AT3G52430.1	11574472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35573	Sorghum	cytosol, nucleus, peroxisome	88.05	89.05
Os09t0392100-01	Rice	cytosol, nucleus, peroxisome, plastid	75.12	74.88
TraesCS5D01G208600.1	Wheat	plastid	74.64	74.16
TraesCS5A01G202200.2	Wheat	cytosol, nucleus, peroxisome, plastid	74.31	73.72
TraesCS5B01G200800.2	Wheat	cytosol, nucleus, peroxisome, plastid	69.14	73.04
HORVU5Hr1G060060.2	Barley	plastid	75.44	70.54
GSMUA_Achr8P25290_001	Banana	plastid	46.69	44.95
VIT_17s0000g07560.t01	Wine grape	cytosol	39.26	40.77
PGSC0003DMT400083030	Potato	cytosol	38.45	40.68
Solyc06g071280.2.1	Tomato	cytosol	39.1	40.2
VIT_17s0000g07370.t01	Wine grape	cytosol	37.0	38.17
KRH63455	Soybean	cytosol	37.64	38.07
KRH54468	Soybean	cytosol	37.64	37.76
KRH54465	Soybean	cytosol	37.32	37.56
CDX83034	Canola	cytosol, extracellular, plastid	30.69	36.12
CDX68479	Canola	cytosol, extracellular, plastid	30.53	35.93
Bra033774.1-P	Field mustard	cytosol	34.09	35.64
VIT_17s0000g07420.t01	Wine grape	cytosol	35.86	34.85
KRH54464	Soybean	cytosol, endoplasmic reticulum	34.73	34.68
CDY44979	Canola	cytosol	33.44	34.5
Bra018085.1-P	Field mustard	cytosol	33.44	34.5
Bra033775.1-P	Field mustard	cytosol	32.47	33.5
CDY68128	Canola	cytosol	32.31	33.33
AT3G48090.1	Thale cress	cytosol	32.96	32.74
AT3G48080.1	Thale cress	cytosol	32.79	32.27
CDX83035	Canola	cytosol	30.05	32.07
CDX68481	Canola	cytosol	23.91	29.31
VIT_17s0000g07400.t01	Wine grape	plastid	25.85	23.88
Zm00001d053138_P002	Maize	cytosol, peroxisome, plastid	21.32	20.03
Zm00001d004706_P002	Maize	cytosol, peroxisome, plastid	20.68	19.66

Protein Annotations

EntrezGene:100281696	MapMan:26.8.2.4.1	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	UniProt:B4FPY6	EMBL:BT039174
ncoils:Coil	EMBL:EU957572	InterPro:Fungal_lipase-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:IPR029058	ProteinID:ONM21696.1	PFAM:PF01764
PANTHER:PTHR21493	PANTHER:PTHR21493:SF94	SUPFAM:SSF53474	UniParc:UPI00017B769E	EnsemblPlantsGene:Zm00001d005708	EnsemblPlants:Zm00001d005708_P001
EnsemblPlants:Zm00001d005708_T001	SEG:seg	:	:	:	:

Description

Protein EDS1

Coordinates

chr2:-:184109212..184113653

Molecular Weight (calculated)

68843.3 Da

IEP (calculated)

6.508

GRAVY (calculated)

-0.232

Length

619 amino acids

Sequence
(BLAST)

001: MPTDSAPPNA ASLSEDDRLL VAHCATLSFP SSSPTAAAAT THSASSFQVH HASHPYPCAA FVFPPSWSAA DWMGGDGGHP PFGDAEVDPA LFPSLRAVGS
101: GIPARTNAAF LGNFRRLLDG STLQSEVSRA VAEEKRVVFT GHSSGGSIAT LAAIWFLEKC TRRGSVNQAH PFCVTFGAPL IGDNIFNHAV KREGWSQCIL
201: HFLLPLDIVP RIPLTPLASF REETQAVLDR LSSQTPNNSP AGRSLVIPEY YETLLRSTLS IASYEACSFM GCTSSILGTL TSFIDLSPYR PCGTYHFLTS
301: SEQLIVLANS DAVLQLLFYC LQLDPQQQLL DAAARSLSAH WQYEPIKYCI QDIVCVDYLG TISSAVPGRQ AGRVALGSIE LSREAILHLS AAAQWEKQRQ
401: RNQTKIDESC QKIQEALRSL NEYKRSRELD GVSYYDSFKL QREVHDFNAN VKRLELAGLW DEIVEMLRRR ELPDGFEARE EWVSLGTLFR RLVEPLDIAN
501: YYRHSKNEDT GSYLSKGRPR RYKYTQKWHE QLQRVPVGSS LESCFWAVVE ELQAEMADGR AFEDLRERLV KLENDAHGWY NSGSLGKDVF LGSSSFVAWW
601: RTLPEQHRAA SSIAKLVSL

Best Arabidopsis Sequence Match ( AT3G48090.1 )
(BLAST)

001: MAFEALTGIN GDLITRSWSA SKQAYLTERY HKEEAGAVVI FAFQPSFSEK DFFDPDNKSS FGEIKLNRVQ FPCMRKIGKG DVATVNEAFL KNLEAIIDPR
101: TSFQASVEMA VRSRKQIVFT GHSSGGATAI LATVWYLEKY FIRNPNVYLE PRCVTFGAPL VGDSIFSHAL GREKWSRFFV NFVSRFDIVP RIMLARKASV
201: EETLPHVLAQ LDPRKSSVQE SEQRITEFYT RVMRDTSTVA NQAVCELTGS AEAFLETLSS FLELSPYRPA GTFVFSTEKR LVAVNNSDAI LQMLFYTSQA
301: SDEQEWSLIP FRSIRDHHSY EELVQSMGKK LFNHLDGENS IESTLNDLGV STRGRQYVQA ALEEEKKRVE NQKKIIQVIE QERFLKKLAW IEDEYKPKCQ
401: AHKNGYYDSF KVSNEENDFK ANVKRAELAG VFDEVLGLMK KCQLPDEFEG DIDWIKLATR YRRLVEPLDI ANYHRHLKNE DTGPYMKRGR PTRYIYAQRG
501: YEHYILKPNG MIAEDVFWNK VNGLNLGLQL EEIQETLKNS GSECGSCFWA EVEELKGKPY EEVEVRVKTL EGMLGEWITD GEVDDKEIFL EGSTFRKWWI
601: TLPKNHKSHS PLRDYMMDEI TDT

Arabidopsis Description

EDS1Protein EDS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU72]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.