Factsheet for TraesCS5B01G200800.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, nucleus, cytosol

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G216100.1
TraesCS4B01G100100.1
TraesCS4D01G096400.2
TraesCS5A01G202200.2
TraesCS5B01G200800.2
TraesCS5D01G208600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48090.1	TraesCS5A01G202200.2	AT3G48090.1	11574472
AT3G48090.1	TraesCS5B01G200800.2	AT3G48090.1	11574472
AT3G48090.1	TraesCS5D01G208600.1	AT3G48090.1	11574472
AT3G48090.1	TraesCS4A01G216100.1	AT3G52430.1	11574472
AT3G48090.1	TraesCS4B01G100100.1	AT3G52430.1	11574472
AT3G48090.1	TraesCS4D01G096400.2	AT3G52430.1	11574472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G208600.1	Wheat	plastid	97.1	91.33
TraesCS5A01G202200.2	Wheat	cytosol, nucleus, peroxisome, plastid	96.59	90.71
HORVU5Hr1G060060.2	Barley	plastid	96.08	85.05
Os09t0392100-01	Rice	cytosol, nucleus, peroxisome, plastid	76.62	72.3
KXG35573	Sorghum	cytosol, nucleus, peroxisome	74.57	71.41
Zm00001d005708_P001	Maize	cytosol, nucleus, peroxisome, plastid	73.04	69.14
GSMUA_Achr8P25290_001	Banana	plastid	48.12	43.86
Solyc06g071280.2.1	Tomato	cytosol	41.47	40.37
PGSC0003DMT400083030	Potato	cytosol	40.27	40.34
VIT_17s0000g07560.t01	Wine grape	cytosol	39.42	38.76
KRH54465	Soybean	cytosol	37.54	35.77
VIT_17s0000g07370.t01	Wine grape	cytosol	36.35	35.5
KRH63455	Soybean	cytosol	36.86	35.29
CDX68479	Canola	cytosol, extracellular, plastid	31.23	34.79
KRH54468	Soybean	cytosol	36.52	34.68
CDX83034	Canola	cytosol, extracellular, plastid	31.06	34.6
Bra033774.1-P	Field mustard	cytosol	34.81	34.46
KRH54464	Soybean	cytosol, endoplasmic reticulum	35.49	33.55
Bra018085.1-P	Field mustard	cytosol	33.79	33.0
CDY44979	Canola	cytosol	33.62	32.83
VIT_17s0000g07420.t01	Wine grape	cytosol	35.49	32.65
Bra033775.1-P	Field mustard	cytosol	33.11	32.33
CDY68128	Canola	cytosol	32.94	32.17
AT3G48090.1	Thale cress	cytosol	33.28	31.3
CDX83035	Canola	cytosol	30.2	30.52
AT3G48080.1	Thale cress	cytosol	31.91	29.73
CDX68481	Canola	cytosol	24.91	28.91
TraesCS4B01G100100.1	Wheat	peroxisome	24.23	21.78
VIT_17s0000g07400.t01	Wine grape	plastid	24.57	21.49

Protein Annotations

EnsemblPlants:TraesCS5B01G200800.2	EnsemblPlantsGene:TraesCS5B01G200800	Gene3D:3.40.50.1820	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:AB_hydrolase	InterPro:Fungal_lipase-like	InterPro:IPR029058	PANTHER:PTHR21493	PANTHER:PTHR21493:SF94	PFAM:PF01764
SEG:seg	SUPFAM:SSF53474	MapMan:26.8.2.4.1	:	:	:

Description

No Description!

Coordinates

chr5B:+:362946545..362957163

Molecular Weight (calculated)

65307.5 Da

IEP (calculated)

7.004

GRAVY (calculated)

-0.278

Length

586 amino acids

Sequence
(BLAST)

001: MPMDTPPPRG AALSDDDRLL VAHCAALSFP SASRSPTSAA SASFQVHHAS HPYPCAAFVF QPTWSAAGWM PSSPDAGGRA PFGDAEVDPA LFPSLRSVGS
101: GVPARASAAF VAAFRGLLDG SPLQTEVSKA VAEEKRVVFT GHSSGGSIAT LAAIWFLENC TRRGSVNQAQ PFCVTFGAPL VGDNVFNHAV RREGWSQCIL
201: HFIMPLDIIP RIPLAPLESS REQIQSVLDW LSPHSPNFSP VGNSLRPLSK KKSPYRPCGT YLFLTSTEQL IILTNSDAVL QLLFYCLQLD PQQQLLDAAA
301: RSLSAHWEYE SIKQNVMQEI VCVDYLRAIS SSLPGRQMNG TAIGGLELSK EAMLSLAAAA QWEKQREINQ AKIDANCSKI QEALKSLNEY KRTCELHEVS
401: YYDSFKLQRE VHDFNSNVRR LELAGLWDEI IEMLRRRELP DAFEGREEWV NLGTSYRRLV EPLDIANYYR HSKNEDTGSY LSKGRPRRYK YTQKWREQLH
501: RIPLGSSLES CFWAMSEELQ AEMINGKSFE DLKDRVGKLE SDALGWFTSG NLGRDVFLSS SSFVIWWKTL PEQHRSASCI ARLVPS

Best Arabidopsis Sequence Match ( AT3G48090.1 )
(BLAST)

001: MAFEALTGIN GDLITRSWSA SKQAYLTERY HKEEAGAVVI FAFQPSFSEK DFFDPDNKSS FGEIKLNRVQ FPCMRKIGKG DVATVNEAFL KNLEAIIDPR
101: TSFQASVEMA VRSRKQIVFT GHSSGGATAI LATVWYLEKY FIRNPNVYLE PRCVTFGAPL VGDSIFSHAL GREKWSRFFV NFVSRFDIVP RIMLARKASV
201: EETLPHVLAQ LDPRKSSVQE SEQRITEFYT RVMRDTSTVA NQAVCELTGS AEAFLETLSS FLELSPYRPA GTFVFSTEKR LVAVNNSDAI LQMLFYTSQA
301: SDEQEWSLIP FRSIRDHHSY EELVQSMGKK LFNHLDGENS IESTLNDLGV STRGRQYVQA ALEEEKKRVE NQKKIIQVIE QERFLKKLAW IEDEYKPKCQ
401: AHKNGYYDSF KVSNEENDFK ANVKRAELAG VFDEVLGLMK KCQLPDEFEG DIDWIKLATR YRRLVEPLDI ANYHRHLKNE DTGPYMKRGR PTRYIYAQRG
501: YEHYILKPNG MIAEDVFWNK VNGLNLGLQL EEIQETLKNS GSECGSCFWA EVEELKGKPY EEVEVRVKTL EGMLGEWITD GEVDDKEIFL EGSTFRKWWI
601: TLPKNHKSHS PLRDYMMDEI TDT

Arabidopsis Description

EDS1Protein EDS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU72]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.