CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH40959
KRH53943
KRH54464
KRH54465
KRH54468
KRH59603
KRH63455
KRH63997

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48090.1	KRH54464	AT3G48090.1	11574472
AT3G48090.1	KRH54465	AT3G48090.1	11574472
AT3G48090.1	KRH54468	AT3G48090.1	11574472
AT3G48090.1	KRH63455	AT3G48090.1	11574472
AT3G48090.1	KRH40959	AT3G52430.1	11574472
AT3G48090.1	KRH53943	AT3G52430.1	11574472
AT3G48090.1	KRH59603	AT3G52430.1	11574472
AT3G48090.1	KRH63997	AT3G52430.1	11574472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63455	Soybean	cytosol	74.07	74.67
KRH54465	Soybean	cytosol	59.32	59.51
VIT_17s0000g07560.t01	Wine grape	cytosol	47.49	49.16
PGSC0003DMT400083030	Potato	cytosol	46.35	48.89
Solyc06g071280.2.1	Tomato	cytosol	45.22	46.35
VIT_17s0000g07370.t01	Wine grape	cytosol	43.6	44.83
KRH54464	Soybean	cytosol, endoplasmic reticulum	44.25	44.03
VIT_17s0000g07420.t01	Wine grape	cytosol	44.89	43.49
CDX83034	Canola	cytosol, extracellular, plastid	33.23	38.97
Bra033774.1-P	Field mustard	cytosol	36.95	38.51
CDX68479	Canola	cytosol, extracellular, plastid	32.58	38.21
Bra033775.1-P	Field mustard	cytosol	36.95	38.0
GSMUA_Achr8P25290_001	Banana	plastid	39.38	37.79
Zm00001d005708_P001	Maize	cytosol, nucleus, peroxisome, plastid	37.76	37.64
AT3G48090.1	Thale cress	cytosol	37.93	37.56
KXG35573	Sorghum	cytosol, nucleus, peroxisome	37.12	37.42
TraesCS5A01G202200.2	Wheat	cytosol, nucleus, peroxisome, plastid	37.76	37.34
TraesCS5D01G208600.1	Wheat	plastid	37.44	37.08
Os09t0392100-01	Rice	cytosol, nucleus, peroxisome, plastid	36.95	36.72
CDX83035	Canola	cytosol	34.36	36.55
TraesCS5B01G200800.2	Wheat	cytosol, nucleus, peroxisome, plastid	34.68	36.52
CDY44979	Canola	cytosol	35.49	36.5
AT3G48080.1	Thale cress	cytosol	36.95	36.25
Bra018085.1-P	Field mustard	cytosol	35.01	36.0
CDY68128	Canola	cytosol	34.85	35.83
HORVU5Hr1G060060.2	Barley	plastid	37.76	35.2
CDX68481	Canola	cytosol	28.53	34.85
VIT_17s0000g07400.t01	Wine grape	plastid	32.9	30.3
KRH40959	Soybean	cytosol	23.66	23.06
KRG93398	Soybean	cytosol	6.32	22.67
KRH59603	Soybean	plastid	19.12	22.56
KRH63997	Soybean	cytosol, nucleus, peroxisome	22.04	21.48
KRH53943	Soybean	cytosol, nucleus, peroxisome	22.04	21.48
KRG93399	Soybean	plastid	18.31	19.25
KRH18587	Soybean	endoplasmic reticulum, nucleus	17.99	19.07
KRH18585	Soybean	mitochondrion	15.56	18.05
KRH18578	Soybean	cytosol	10.86	17.91

Protein Annotations

EntrezGene:100775870	MapMan:26.8.2.4.1	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	EMBL:ACUP02003528	EMBL:ACUP02003529
ncoils:Coil	InterPro:Fungal_lipase-like	EnsemblPlantsGene:GLYMA_06G187400	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:IPR029058	UniProt:K7KVV2	ProteinID:KRH54466.1
EnsemblPlants:KRH54468	ProteinID:KRH54468	ProteinID:KRH54468.1	PFAM:PF01764	PANTHER:PTHR21493	PANTHER:PTHR21493:SF94
SUPFAM:SSF53474	UniParc:UPI000296AE51	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:16334775..16338249

Molecular Weight (calculated)

70849.5 Da

IEP (calculated)

7.600

GRAVY (calculated)

-0.468

Length

617 amino acids

Sequence
(BLAST)

001: MKNYRIRDNM AGGSLGDNIG LKEDAIKRVC GLACKANNHK STDKLYFYDK VQISSETYHV FSFPGSWDPA EWFVNKPFGV SKINSTQFPS LRSIGNDELA
101: WVNEGFAKRF DRLLETNFED VVKKAILDGK QVVFTGHSSG AAMATQTTFW VLEKYFNPTK IQKPKLPFCV TFGSPLIGNH IFSHASRREN WSRYFIHFVL
201: RYDIVPRILL APLASIEENF GSVLQFLNPK SKTSTQDPTR AILISEVYKT VMRNAASVTS HAACILMGST NLLLETVANF VELSPYRPFG TYVFCNGNGQ
301: LIVVENSDAV LQLLFHTALL SDLAELEEVA DKSISQHLNY VAELQESLGM QNVVYLEQLE QLPLSADGSN SDVATALDGL GLNTRARLCL RAAGELEKQK
401: RKNEDKIMKE IQDKALTSMK ELQNYKTTCE MHKGKGYYDA FKVQKESNDF QANVKRLVLA GVWDEVIEML KRYELPDEFE GDKEWIKRGT EYRRLVEPLD
501: IANYYRHLKN EDTGPYMIRA RPKRYRYTQR WLEHAKRMPP APITESTFWA EVEELYSWIN SKKPLDDHVE QRVKQLQKDL KNWTDDEKVL AKDTFLKDPN
601: FIRWKDILPQ ELKDTSS

Best Arabidopsis Sequence Match ( AT3G48090.1 )
(BLAST)

001: MAFEALTGIN GDLITRSWSA SKQAYLTERY HKEEAGAVVI FAFQPSFSEK DFFDPDNKSS FGEIKLNRVQ FPCMRKIGKG DVATVNEAFL KNLEAIIDPR
101: TSFQASVEMA VRSRKQIVFT GHSSGGATAI LATVWYLEKY FIRNPNVYLE PRCVTFGAPL VGDSIFSHAL GREKWSRFFV NFVSRFDIVP RIMLARKASV
201: EETLPHVLAQ LDPRKSSVQE SEQRITEFYT RVMRDTSTVA NQAVCELTGS AEAFLETLSS FLELSPYRPA GTFVFSTEKR LVAVNNSDAI LQMLFYTSQA
301: SDEQEWSLIP FRSIRDHHSY EELVQSMGKK LFNHLDGENS IESTLNDLGV STRGRQYVQA ALEEEKKRVE NQKKIIQVIE QERFLKKLAW IEDEYKPKCQ
401: AHKNGYYDSF KVSNEENDFK ANVKRAELAG VFDEVLGLMK KCQLPDEFEG DIDWIKLATR YRRLVEPLDI ANYHRHLKNE DTGPYMKRGR PTRYIYAQRG
501: YEHYILKPNG MIAEDVFWNK VNGLNLGLQL EEIQETLKNS GSECGSCFWA EVEELKGKPY EEVEVRVKTL EGMLGEWITD GEVDDKEIFL EGSTFRKWWI
601: TLPKNHKSHS PLRDYMMDEI TDT

Arabidopsis Description

EDS1Protein EDS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU72]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.