Factsheet for TraesCS5D01G208600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, peroxisome, plastid
ChloroP:	plastid
MultiLoc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G216100.1
TraesCS4B01G100100.1
TraesCS4D01G096400.2
TraesCS5A01G202200.2
TraesCS5B01G200800.2
TraesCS5D01G208600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48090.1	TraesCS5A01G202200.2	AT3G48090.1	11574472
AT3G48090.1	TraesCS5B01G200800.2	AT3G48090.1	11574472
AT3G48090.1	TraesCS5D01G208600.1	AT3G48090.1	11574472
AT3G48090.1	TraesCS4A01G216100.1	AT3G52430.1	11574472
AT3G48090.1	TraesCS4B01G100100.1	AT3G52430.1	11574472
AT3G48090.1	TraesCS4D01G096400.2	AT3G52430.1	11574472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G202200.2	Wheat	cytosol, nucleus, peroxisome, plastid	97.91	97.76
TraesCS5B01G200800.2	Wheat	cytosol, nucleus, peroxisome, plastid	91.33	97.1
HORVU5Hr1G060060.2	Barley	plastid	96.15	90.48
Os09t0392100-01	Rice	cytosol, nucleus, peroxisome, plastid	77.85	78.1
KXG35573	Sorghum	cytosol, nucleus, peroxisome	75.6	76.96
Zm00001d005708_P001	Maize	cytosol, nucleus, peroxisome, plastid	74.16	74.64
GSMUA_Achr8P25290_001	Banana	plastid	47.51	46.03
Solyc06g071280.2.1	Tomato	cytosol	41.57	43.02
PGSC0003DMT400083030	Potato	cytosol	40.13	42.73
VIT_17s0000g07560.t01	Wine grape	cytosol	40.13	41.95
VIT_17s0000g07370.t01	Wine grape	cytosol	37.24	38.67
KRH63455	Soybean	cytosol	37.24	37.91
KRH54465	Soybean	cytosol	37.4	37.89
KRH54468	Soybean	cytosol	37.08	37.44
CDX83034	Canola	cytosol, extracellular, plastid	30.98	36.69
CDX68479	Canola	cytosol, extracellular, plastid	30.98	36.69
Bra033774.1-P	Field mustard	cytosol	34.51	36.32
KRH54464	Soybean	cytosol, endoplasmic reticulum	35.63	35.81
VIT_17s0000g07420.t01	Wine grape	cytosol	36.12	35.32
Bra018085.1-P	Field mustard	cytosol	33.55	34.83
CDY44979	Canola	cytosol	33.39	34.67
CDY68128	Canola	cytosol	32.58	33.83
Bra033775.1-P	Field mustard	cytosol	32.42	33.67
AT3G48090.1	Thale cress	cytosol	33.55	33.55
AT3G48080.1	Thale cress	cytosol	32.58	32.27
CDX83035	Canola	cytosol	29.7	31.9
CDX68481	Canola	cytosol	24.24	29.9
VIT_17s0000g07400.t01	Wine grape	plastid	25.84	24.03
TraesCS4D01G096400.2	Wheat	peroxisome	23.43	22.39

Protein Annotations

EnsemblPlants:TraesCS5D01G208600.1	EnsemblPlantsGene:TraesCS5D01G208600	Gene3D:3.40.50.1820	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
InterPro:AB_hydrolase	InterPro:Fungal_lipase-like	InterPro:IPR029058	PANTHER:PTHR21493	PANTHER:PTHR21493:SF94	PFAM:PF01764
SEG:seg	SUPFAM:SSF53474	MapMan:26.8.2.4.1	:	:	:

Description

No Description!

Coordinates

chr5D:+:314899164..314902312

Molecular Weight (calculated)

68940.6 Da

IEP (calculated)

6.164

GRAVY (calculated)

-0.183

Length

623 amino acids

Sequence
(BLAST)

001: MPMDTPPPRG AALSDDDRLL VAHCAALSFP SASRSPPSAA AASSASFQAH HASHPYPCAA FVFPPTWSAA AWMPSSPDAG GRAPFGDAEV DPALFPSLRS
101: VGSGVPARAS AAFVAAFSGL LDGSPLQTEV SKAVAEEKRV VFTGHSSGGS IATLAAIWFL ENCTRRGSVN QAQPFCVTFG APLVGDNVFN HAVRREGWSQ
201: CILHFIMPLD IIPRIPLAPL SSSREQIQSV LDWLSPHSPN FSPVGNSLVI PEFYETLLRS TLSIASYEAC SFMGCTSSIL GTLTSFIELS PYRPCGTYLF
301: LTSTDQLIIL TNSDAVLQLL FYCLQLDPQQ QLLDAAARSL SAHWEYESIK QSVMQEIGCV DYLRAISSSL PGRQMNGTAI GGLELSKEAM LSLAAAAQWE
401: KQREINQAKI DANCSKIQEA LKSLNEYKRT CELHEVSYYD SFKLQREVHD FNSNVRRLEL AGFWDEIIEM LRRRELPDAF EGREEWVNLG TSYRRLVEPL
501: DIANYYRHSK NEDTGSYLSK GRPRRYKYTQ KWREQSHRIP LGSSLESCFW AMSEELQAEM INGKSFEDLK DRVGKLESDA LGWFTSGNLG RDVFLSSSSF
601: VIWWKTLPEQ HRSASCIARL VPS

Best Arabidopsis Sequence Match ( AT3G48090.1 )
(BLAST)

001: MAFEALTGIN GDLITRSWSA SKQAYLTERY HKEEAGAVVI FAFQPSFSEK DFFDPDNKSS FGEIKLNRVQ FPCMRKIGKG DVATVNEAFL KNLEAIIDPR
101: TSFQASVEMA VRSRKQIVFT GHSSGGATAI LATVWYLEKY FIRNPNVYLE PRCVTFGAPL VGDSIFSHAL GREKWSRFFV NFVSRFDIVP RIMLARKASV
201: EETLPHVLAQ LDPRKSSVQE SEQRITEFYT RVMRDTSTVA NQAVCELTGS AEAFLETLSS FLELSPYRPA GTFVFSTEKR LVAVNNSDAI LQMLFYTSQA
301: SDEQEWSLIP FRSIRDHHSY EELVQSMGKK LFNHLDGENS IESTLNDLGV STRGRQYVQA ALEEEKKRVE NQKKIIQVIE QERFLKKLAW IEDEYKPKCQ
401: AHKNGYYDSF KVSNEENDFK ANVKRAELAG VFDEVLGLMK KCQLPDEFEG DIDWIKLATR YRRLVEPLDI ANYHRHLKNE DTGPYMKRGR PTRYIYAQRG
501: YEHYILKPNG MIAEDVFWNK VNGLNLGLQL EEIQETLKNS GSECGSCFWA EVEELKGKPY EEVEVRVKTL EGMLGEWITD GEVDDKEIFL EGSTFRKWWI
601: TLPKNHKSHS PLRDYMMDEI TDT

Arabidopsis Description

EDS1Protein EDS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU72]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.