Factsheet for Bra018085.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra006922.1-P
Bra012805.1-P
Bra018085.1-P
Bra033431.1-P
Bra033774.1-P
Bra033775.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48090.1	Bra018085.1-P	AT3G48090.1	11574472
AT3G48090.1	Bra033774.1-P	AT3G48090.1	11574472
AT3G48090.1	Bra033775.1-P	AT3G48090.1	11574472
AT3G48090.1	Bra006922.1-P	AT3G52430.1	11574472
AT3G48090.1	Bra012805.1-P	AT3G52430.1	11574472
AT3G48090.1	Bra033431.1-P	AT3G52430.1	11574472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68128	Canola	cytosol	95.5	95.5
Bra033774.1-P	Field mustard	cytosol	72.17	73.14
Bra033775.1-P	Field mustard	cytosol	64.83	64.83
AT3G48080.1	Thale cress	cytosol	61.17	58.35
AT3G48090.1	Thale cress	cytosol	60.17	57.95
PGSC0003DMT400083030	Potato	cytosol	38.0	38.97
Solyc06g071280.2.1	Tomato	cytosol	38.0	37.87
VIT_17s0000g07560.t01	Wine grape	cytosol	36.67	36.91
KRH63455	Soybean	cytosol	37.17	36.44
KRH54465	Soybean	cytosol	36.0	35.12
KRH54468	Soybean	cytosol	36.0	35.01
KRH54464	Soybean	cytosol, endoplasmic reticulum	36.17	35.0
KXG35573	Sorghum	cytosol, nucleus, peroxisome	35.5	34.8
Os09t0392100-01	Rice	cytosol, nucleus, peroxisome, plastid	35.67	34.46
VIT_17s0000g07370.t01	Wine grape	cytosol	34.0	34.0
TraesCS5B01G200800.2	Wheat	cytosol, nucleus, peroxisome, plastid	33.0	33.79
TraesCS5A01G202200.2	Wheat	cytosol, nucleus, peroxisome, plastid	35.0	33.65
GSMUA_Achr8P25290_001	Banana	plastid	36.0	33.59
TraesCS5D01G208600.1	Wheat	plastid	34.83	33.55
Zm00001d005708_P001	Maize	cytosol, nucleus, peroxisome, plastid	34.5	33.44
HORVU5Hr1G060060.2	Barley	plastid	35.5	32.18
VIT_17s0000g07420.t01	Wine grape	cytosol	33.83	31.87
Bra033431.1-P	Field mustard	plastid	17.17	23.95
VIT_17s0000g07400.t01	Wine grape	plastid	25.33	22.69
Bra006274.1-P	Field mustard	nucleus	17.83	21.36
Bra008729.1-P	Field mustard	cytosol	18.5	21.1
Bra006922.1-P	Field mustard	cytosol, nucleus, peroxisome	18.83	20.66
Bra012805.1-P	Field mustard	plasma membrane	19.0	18.1
Bra008731.1-P	Field mustard	extracellular, plasma membrane, vacuole	17.83	15.03

Protein Annotations

EnsemblPlants:Bra018085.1	EnsemblPlants:Bra018085.1-P	EnsemblPlantsGene:Bra018085	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:Fungal_lipase-like
InterPro:IPR029058	PANTHER:PTHR21493	PANTHER:PTHR21493:SF94	PFAM:PF01764	SEG:seg	SUPFAM:SSF53474
UniParc:UPI000253F378	UniProt:M4DNJ8	MapMan:26.8.2.4.1	:	:	:

Description

AT3G48080 (E=1e-188) | lipase class 3 family protein / disease resistance protein-related

Coordinates

chrA06:+:10121383..10123498

Molecular Weight (calculated)

68590.3 Da

IEP (calculated)

6.732

GRAVY (calculated)

-0.460

Length

600 amino acids

Sequence
(BLAST)

001: MALEAFAGIS NDLITRACMA STRAYNTDHF HKEEERETVF VAVRPSFLEK DWFAPENKSP FGETNMKRAQ FPCMRSIGND VDATVNESFL ENFQVLTSPT
101: TSFCDYVKTV VDSRQSQRIV FTGHSTGGAT AILATVWYLE TYFKKPRGGF PLPEPLCVTF GAPLVGDYVF KHALGRENWS RFFVNFVTRF DIVPRIMLAG
201: KASTKQALPH VLSQLDPRVA IQENDQSIPG FYTTVMKETA TVAHQAVCEL IGYGDAFLET FSSFLDLSPY RPAGIFVFST GTGLVSVSNS DAILQILFYA
301: SQSSNQDELS LVPFQSIKDH RSYEEMVHSM AMKPLNHLDL HHLPLDGDPI LRDLGLSTRA RQCVCAAFEA EKQRVDNQTK IYNKLPKIVE KLTWIEDEYK
401: PRCKTHKNGY YDSFKYSNEE KDFKANVSRA ELAGLFDEVL GLVKKGLLPD GFEGHREWIE LSTRYRRLIE PLDISNYHRH LKNEDTGPYM RKGRPNRYKH
501: AQRGYEHELL KAGKSAEEIK ESGCGSCFWA DVEELKGKAY ESVEVKRFEK LVEGWIANRE IDDEQIFLEG STFRKWWHSL PEEHKRSSLL RERMAETRST

Best Arabidopsis Sequence Match ( AT3G48080.1 )
(BLAST)

001: MAFEALTGVN GDLVTISWMA SKGANQTEHY LKEEVGGTVF FAFRASFSSE DLFATENTSP FGEIKMKRNQ FPCMRSIGND VDTTVNEAFL KSLEVLIGPR
101: TSFHASVQSA VDRKQQVVFT GHSFGGATAI LATVWYLETY FIRDAYAAPE PRCVTFGAPL VGDYIFKHAL GRENWSRFFV NFVTRFDIVP RIMLARKTTI
201: EQTLSYVLGK LDSTRAPIHE SDQVITEFYT RVMRDTYTVA SKAVCQLIGN GEAFLETLSS FYELSPYRPV GTFVFSTQKR LVVVNNSDAI LQMLFYTCQS
301: NDEQELSVIP FLSIRDHHGY EELVQSIGIK LLNHLDLHNP LLDGENSIGS ALDDLGMSTR ARQCIHAALE AEKQRVENQK KIETKRDQIV ERLTWIVEVY
401: KPKCQAHKNG YYDSFKDSNE ENDFKANVKR VELAGIFDEV LGLVKKGQLP DGFEGSRGWI NLATQYRRLI EPLDISNYHG QLKNEDTGPY MLHGRPSRYK
501: YAQRGYEHDI LKPTGMIAKD VFWSKVNGLN LGLQQDIQEI LKNSGSECGS CFWAEVEELK GKPYEEVQVR FKTLEGLLEG WIKDGEVDEK EIFLEGSTFR
601: KWWNTLPDSH KIHAPLYPRE RMMDETRAT

Arabidopsis Description

EDS1BProtein EDS1B [Source:UniProtKB/Swiss-Prot;Acc:Q9SU71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.