Factsheet for Bra033431.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
vacuole 1
mitochondrion 2
extracellular 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra018085.1-P
Bra033774.1-P
Bra033775.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52430.1	Bra018085.1-P	AT3G48090.1	11574472
AT3G52430.1	Bra033774.1-P	AT3G48090.1	11574472
AT3G52430.1	Bra033775.1-P	AT3G48090.1	11574472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23217	Canola	plastid	100.0	100.0
Bra006922.1-P	Field mustard	cytosol, nucleus, peroxisome	76.74	60.33
AT3G52430.1	Thale cress	cytosol, nucleus, peroxisome	68.84	54.71
Bra012805.1-P	Field mustard	plasma membrane	74.42	50.79
VIT_07s0031g02390.t01	Wine grape	cytosol	45.81	31.83
PGSC0003DMT400051170	Potato	cytosol	40.93	30.45
Solyc02g032850.2.1	Tomato	cytosol	40.93	30.45
KRH53943	Soybean	cytosol, nucleus, peroxisome	44.42	30.17
KRH40959	Soybean	cytosol	43.02	29.23
KRH63997	Soybean	cytosol, nucleus, peroxisome	43.02	29.23
GSMUA_Achr2P20660_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	40.23	28.36
GSMUA_Achr6P12900_001	Banana	cytosol	37.67	26.87
KRH59603	Soybean	plastid	32.09	26.39
Zm00001d004706_P002	Maize	cytosol, peroxisome, plastid	38.84	25.65
TraesCS4B01G100100.1	Wheat	peroxisome	38.14	25.15
TraesCS4A01G216100.1	Wheat	peroxisome	37.91	25.04
TraesCS4D01G096400.2	Wheat	peroxisome	37.91	25.0
Zm00001d053138_P002	Maize	cytosol, peroxisome, plastid	38.14	24.89
EES08158	Sorghum	cytosol, peroxisome, plastid	38.6	24.78
HORVU4Hr1G043530.1	Barley	mitochondrion	38.6	23.58
Os11t0195500-01	Rice	mitochondrion	28.37	22.8
Bra008729.1-P	Field mustard	cytosol	22.79	18.63
Bra006274.1-P	Field mustard	nucleus	20.7	17.76
Bra018085.1-P	Field mustard	cytosol	23.95	17.17
Bra033774.1-P	Field mustard	cytosol	23.26	16.89
Bra033775.1-P	Field mustard	cytosol	23.02	16.5
Bra008731.1-P	Field mustard	extracellular, plasma membrane, vacuole	24.42	14.75

Protein Annotations

MapMan:26.8.2.4.2	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	EnsemblPlantsGene:Bra033431	EnsemblPlants:Bra033431.1	EnsemblPlants:Bra033431.1-P
ncoils:Coil	InterPro:Fungal_lipase-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:IPR029058
UniProt:M4EX95	PFAM:PF01764	PANTHER:PTHR21493	PANTHER:PTHR21493:SF130	SUPFAM:SSF53474	TMHMM:TMhelix
UniParc:UPI0002545464	SEG:seg	:	:	:	:

Description

AT3G52430 (E=3e-162) PAD4, ATPAD4 | PAD4 (PHYTOALEXIN DEFICIENT 4); lipase/ protein binding / triacylglycerol lipase

Coordinates

chrA04:-:4169398..4170690

Molecular Weight (calculated)

49121.3 Da

IEP (calculated)

8.360

GRAVY (calculated)

-0.442

Length

430 amino acids

Sequence
(BLAST)

001: MEERKQVVIT GHSTGGSVAA LTALWLLSQP SKPSFRLLCI TFGSPLLGNQ SLSSSISRSR LAHNFCNVVS IHDLAPRRND DLWPFGTFLF CSDNGGVCLD
101: NADSVRRMFF ILNSTGTPNI EERPRYEHYV STLSHQFLVS RSFSGGSLSD NSYQAGVALA VESLGFSRDN PSGVSAKECI EAATEITRAP IVRSSELAIE
201: LGNVLPSRLE IQWFKDSCDG SPKQLGYYDN FKVMSKREMK VNMSRAKLAK FWDGVIRMVE KKELPFDFHL GKKWVYASQF YQLLAEPLDI AYFYKYDYSR
301: TKGHYMENGN RHKRYVEIDK WWKEKGEPHK EKGARTRNAS TTQDTCFWAK LEEAKECLDD MKSESIDEQR RYLLWKRIVG FESYANTLVK MKEVSVDVLA
401: RNSSYSVWVE RLSEFKIKNG NMVADDAMEF

Best Arabidopsis Sequence Match ( AT3G52430.1 )
(BLAST)

001: MDDCRFETSE LQASVMISTP LFTDSWSSCN TANCNGSIKI HDIAGITYVA IPAVSMIQLG NLVGLPVTGD VLFPGLSSDE PLPMVDAAIL KLFLQLKIKE
101: GLELELLGKK LVVITGHSTG GALAAFTALW LLSQSSPPSF RVFCITFGSP LLGNQSLSTS ISRSRLAHNF CHVVSIHDLV PRSSNEQFWP FGTYLFCSDK
201: GGVCLDNAGS VRLMFNILNT TATQNTEEHQ RYGHYVFTLS HMFLKSRSFL GGSIPDNSYQ AGVALAVEAL GFSNDDTSGV LVKECIETAT RIVRAPILRS
301: AELANELASV LPARLEIQWY KDRCDASEEQ LGYYDFFKRY SLKRDFKVNM SRIRLAKFWD TVIKMVETNE LPFDFHLGKK WIYASQFYQL LAEPLDIANF
401: YKNRDIKTGG HYLEGNRPKR YEVIDKWQKG VKVPEECVRS RYASTTQDTC FWAKLEQAKE WLDEARKESS DPQRRSLLRE KIVPFESYAN TLVTKKEVSL
501: DVKAKNSSYS VWEANLKEFK CKMGYENEIE MVVDESDAME T

Arabidopsis Description

PAD4Lipase-like PAD4 [Source:UniProtKB/Swiss-Prot;Acc:Q9S745]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.