Factsheet for AT3G52430.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033431.1-P	Field mustard	plastid	54.71	68.84
CDY23217	Canola	plastid	54.71	68.84
CDY67344	Canola	plastid	53.79	67.67
Bra006922.1-P	Field mustard	cytosol, nucleus, peroxisome	65.8	65.08
CDX78091	Canola	cytosol, nucleus, peroxisome	65.43	64.72
CDY69054	Canola	cytosol	52.87	64.71
CDX73637	Canola	cytosol, nucleus, peroxisome	65.25	64.42
CDY68190	Canola	cytosol	36.78	62.78
CDY29081	Canola	cytosol, endoplasmic reticulum, peroxisome	63.4	62.48
CDX90603	Canola	plasma membrane	64.14	55.08
Bra012805.1-P	Field mustard	plasma membrane	63.96	54.92
VIT_07s0031g02390.t01	Wine grape	cytosol	43.25	37.8
PGSC0003DMT400051170	Potato	cytosol	38.08	35.64
Solyc02g032850.2.1	Tomato	cytosol	37.52	35.12
KRH53943	Soybean	cytosol, nucleus, peroxisome	40.67	34.76
KRH63997	Soybean	cytosol, nucleus, peroxisome	40.11	34.28
KRH40959	Soybean	cytosol	39.56	33.81
GSMUA_Achr2P20660_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	37.15	32.95
KRH59603	Soybean	plastid	31.42	32.5
GSMUA_Achr6P12900_001	Banana	cytosol	36.23	32.5
Os11t0195500-01	Rice	mitochondrion	28.84	29.16
Zm00001d004706_P002	Maize	cytosol, peroxisome, plastid	34.94	29.03
TraesCS4A01G216100.1	Wheat	peroxisome	34.75	28.88
TraesCS4D01G096400.2	Wheat	peroxisome	34.75	28.83
TraesCS4B01G100100.1	Wheat	peroxisome	34.75	28.83
EES08158	Sorghum	cytosol, peroxisome, plastid	35.67	28.81
Zm00001d053138_P002	Maize	cytosol, peroxisome, plastid	34.01	27.92
HORVU4Hr1G043530.1	Barley	mitochondrion	34.57	26.56
AT5G14930.2	Thale cress	cytosol, nucleus, plastid	23.66	23.84
AT3G48090.1	Thale cress	cytosol	20.7	17.98
AT3G48080.1	Thale cress	cytosol	20.52	17.65

Protein Annotations

MapMan:26.8.2.4.2	Gene3D:3.40.50.1820	EntrezGene:824408	UniProt:A0A178V847	ProteinID:ABR46037.1	ProteinID:ABR46038.1
ProteinID:ABR46039.1	ProteinID:ABR46041.1	ProteinID:ABR46043.1	ProteinID:ABR46045.1	ProteinID:ABR46046.1	ProteinID:ABR46047.1
ProteinID:ABR46051.1	ProteinID:ABR46052.1	ProteinID:ABR46053.1	ProteinID:ABZ02805.1	ProteinID:ABZ02806.1	ProteinID:ABZ02807.1
ProteinID:ABZ02810.1	ProteinID:ABZ02811.1	ProteinID:ABZ02813.1	ProteinID:ABZ02814.1	ProteinID:ABZ02816.1	ProteinID:ABZ02820.1
ProteinID:ABZ02822.1	ProteinID:ABZ02823.1	ProteinID:ABZ02824.1	ProteinID:ABZ02825.1	ProteinID:ABZ02834.1	ProteinID:ABZ02835.1
ProteinID:ABZ02836.1	ProteinID:ABZ02838.1	ProteinID:ABZ02841.1	ProteinID:ABZ02842.1	ProteinID:ABZ02844.1	ProteinID:ABZ02849.1
ProteinID:ABZ02851.1	ProteinID:ABZ02853.1	ProteinID:ABZ02854.1	ProteinID:ABZ02855.1	ProteinID:ABZ02856.1	ProteinID:ABZ02858.1
ProteinID:ABZ02866.1	ProteinID:ABZ02867.1	ProteinID:ABZ02869.1	ProteinID:ABZ02870.1	ProteinID:ABZ02871.1	ProteinID:ABZ02873.1
ProteinID:ABZ02874.1	ProteinID:ABZ02875.1	ProteinID:ABZ02876.1	ProteinID:ABZ02878.1	ProteinID:ABZ02880.1	ProteinID:ABZ02884.1
ProteinID:ABZ02885.1	ProteinID:ABZ02889.1	ProteinID:ABZ02892.1	ProteinID:ABZ02893.1	ProteinID:ABZ02898.1	InterPro:AB_hydrolase
ProteinID:AEE78945.1	EMBL:AF188329	ArrayExpress:AT3G52430	EnsemblPlantsGene:AT3G52430	RefSeq:AT3G52430	TAIR:AT3G52430
RefSeq:AT3G52430-TAIR-G	EnsemblPlants:AT3G52430.1	TAIR:AT3G52430.1	ProteinID:CAB43438.1	InterPro:Fungal_lipase-like	GO:GO:0001666
GO:GO:0002213	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006629	GO:GO:0006950
GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0008219	GO:GO:0009056	GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009617
GO:GO:0009625	GO:GO:0009626	GO:GO:0009627	GO:GO:0009628	GO:GO:0009653	GO:GO:0009719
GO:GO:0009751	GO:GO:0009816	GO:GO:0009862	GO:GO:0009873	GO:GO:0009987	GO:GO:0010105
GO:GO:0010150	GO:GO:0010225	GO:GO:0010310	GO:GO:0010618	GO:GO:0010942	GO:GO:0016042
GO:GO:0016298	GO:GO:0016740	GO:GO:0016787	GO:GO:0019748	GO:GO:0031348	GO:GO:0051707
GO:GO:0071327	GO:GO:0080142	GO:GO:0080151	GO:GO:1900367	GO:GO:1900426	GO:GO:1901183
GO:GO:2000022	GO:GO:2000031	InterPro:IPR029058	RefSeq:NP_190811.1	ProteinID:OAP01954.1	Symbol:PAD4
PFAM:PF01764	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PANTHER:PTHR21493	PANTHER:PTHR21493:SF130	UniProt:Q9S745	SUPFAM:SSF53474
UniParc:UPI000009D94F	SEG:seg	:	:	:	:

Description

PAD4Lipase-like PAD4 [Source:UniProtKB/Swiss-Prot;Acc:Q9S745]

Coordinates

chr3:+:19431095..19434450

Molecular Weight (calculated)

60987.9 Da

IEP (calculated)

6.361

GRAVY (calculated)

-0.192

Length

541 amino acids

Sequence
(BLAST)

001: MDDCRFETSE LQASVMISTP LFTDSWSSCN TANCNGSIKI HDIAGITYVA IPAVSMIQLG NLVGLPVTGD VLFPGLSSDE PLPMVDAAIL KLFLQLKIKE
101: GLELELLGKK LVVITGHSTG GALAAFTALW LLSQSSPPSF RVFCITFGSP LLGNQSLSTS ISRSRLAHNF CHVVSIHDLV PRSSNEQFWP FGTYLFCSDK
201: GGVCLDNAGS VRLMFNILNT TATQNTEEHQ RYGHYVFTLS HMFLKSRSFL GGSIPDNSYQ AGVALAVEAL GFSNDDTSGV LVKECIETAT RIVRAPILRS
301: AELANELASV LPARLEIQWY KDRCDASEEQ LGYYDFFKRY SLKRDFKVNM SRIRLAKFWD TVIKMVETNE LPFDFHLGKK WIYASQFYQL LAEPLDIANF
401: YKNRDIKTGG HYLEGNRPKR YEVIDKWQKG VKVPEECVRS RYASTTQDTC FWAKLEQAKE WLDEARKESS DPQRRSLLRE KIVPFESYAN TLVTKKEVSL
501: DVKAKNSSYS VWEANLKEFK CKMGYENEIE MVVDESDAME T

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.