Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69054 | Canola | cytosol | 89.27 | 64.03 |
| CDY23217 | Canola | plastid | 64.67 | 47.67 |
| CDY67344 | Canola | plastid | 64.35 | 47.44 |
| CDX73637 | Canola | cytosol, nucleus, peroxisome | 80.44 | 46.53 |
| CDX78091 | Canola | cytosol, nucleus, peroxisome | 79.5 | 46.07 |
| CDY29081 | Canola | cytosol, endoplasmic reticulum, peroxisome | 66.25 | 38.25 |
| AT3G52430.1 | Thale cress | cytosol, nucleus, peroxisome | 62.78 | 36.78 |
| CDX90603 | Canola | plasma membrane | 65.93 | 33.17 |
| VIT_07s0031g02390.t01 | Wine grape | cytosol | 43.53 | 22.29 |
| PGSC0003DMT400051170 | Potato | cytosol | 39.12 | 21.45 |
| KRH40959 | Soybean | cytosol | 42.27 | 21.17 |
| KRH53943 | Soybean | cytosol, nucleus, peroxisome | 41.64 | 20.85 |
| KRH63997 | Soybean | cytosol, nucleus, peroxisome | 41.32 | 20.7 |
| Solyc02g032850.2.1 | Tomato | cytosol | 37.54 | 20.59 |
| GSMUA_Achr2P20660_001 | Banana | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 38.49 | 20.0 |
| GSMUA_Achr6P12900_001 | Banana | cytosol | 36.91 | 19.4 |
| Zm00001d004706_P002 | Maize | cytosol, peroxisome, plastid | 37.54 | 18.28 |
| Zm00001d053138_P002 | Maize | cytosol, peroxisome, plastid | 37.54 | 18.06 |
| EES08158 | Sorghum | cytosol, peroxisome, plastid | 37.22 | 17.61 |
| TraesCS4D01G096400.2 | Wheat | peroxisome | 35.33 | 17.18 |
| TraesCS4B01G100100.1 | Wheat | peroxisome | 35.33 | 17.18 |
| KRH59603 | Soybean | plastid | 28.08 | 17.02 |
| TraesCS4A01G216100.1 | Wheat | peroxisome | 34.7 | 16.9 |
| HORVU4Hr1G043530.1 | Barley | mitochondrion | 35.02 | 15.77 |
| CDY00844 | Canola | extracellular | 3.15 | 15.38 |
| CDX70581 | Canola | cytosol | 21.77 | 13.12 |
| CDX78600 | Canola | extracellular | 22.08 | 13.11 |
| CDX68479 | Canola | cytosol, extracellular, plastid | 21.45 | 12.93 |
| Os11t0195500-01 | Rice | mitochondrion | 21.77 | 12.9 |
| CDY09899 | Canola | extracellular, vacuole | 21.14 | 12.36 |
| CDX83034 | Canola | cytosol, extracellular, plastid | 20.5 | 12.36 |
| CDX70584 | Canola | cytosol | 20.5 | 12.36 |
| CDX70582 | Canola | cytosol | 20.19 | 12.33 |
| CDY44979 | Canola | cytosol | 22.71 | 12.0 |
| CDY09901 | Canola | cytosol, endoplasmic reticulum, nucleus | 14.51 | 11.98 |
| CDY69990 | Canola | endoplasmic reticulum | 21.14 | 11.82 |
| CDX83035 | Canola | cytosol | 21.14 | 11.55 |
| CDY68128 | Canola | cytosol | 21.77 | 11.5 |
| CDY29080 | Canola | extracellular | 2.52 | 11.43 |
| CDX78601 | Canola | nucleus | 16.72 | 10.56 |
| CDX68481 | Canola | cytosol | 15.46 | 9.7 |
Protein Annotations
| EnsemblPlants:CDY68190 | EnsemblPlantsGene:GSBRNA2T00070054001 | ncoils:Coil | PANTHER:PTHR21493 | PANTHER:PTHR21493:SF130 | ProteinID:CDY68190 |
| ProteinID:CDY68190.1 | UniParc:UPI0004EEBDA1 | UniProt:A0A078JNZ6 | MapMan:35.1 | : | : |
Description
BnaAnng26420DBnaAnng26420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JNZ6]
Coordinates
chrLK036958:+:5033..5986
Molecular Weight (calculated)
37115.9 Da
IEP (calculated)
8.732
GRAVY (calculated)
-0.736
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRILNSTGT PKIEEHQGYG YYVSTLSHQF LISRSSCGGR ISDNSYEAGV ALAVESLGFC NDQESGVLVK ECIETATKKN RAPILRTSEL PKHIEWYKHN
101: CDVSPKQFGY YDNFRQFSNT REIRVNMSRA KLAKFWDGVL EMVEKNELPF DFYLAKKWVY TSKFYQLLFE PLDIAYFYKY KYSRTSGHYM KSGNRPKRYE
201: VIDKWWKERG EPNKEKRART RYASTTQDTC FWAKLEEAKE CLDDLTCENS DAQRRTLLRE KIDGSERYSA TLVKMKEVSK DVLATNSSYT VWVEKLREFN
301: KLKMSNGVVD ESDAMET
101: CDVSPKQFGY YDNFRQFSNT REIRVNMSRA KLAKFWDGVL EMVEKNELPF DFYLAKKWVY TSKFYQLLFE PLDIAYFYKY KYSRTSGHYM KSGNRPKRYE
201: VIDKWWKERG EPNKEKRART RYASTTQDTC FWAKLEEAKE CLDDLTCENS DAQRRTLLRE KIDGSERYSA TLVKMKEVSK DVLATNSSYT VWVEKLREFN
301: KLKMSNGVVD ESDAMET
001: MDDCRFETSE LQASVMISTP LFTDSWSSCN TANCNGSIKI HDIAGITYVA IPAVSMIQLG NLVGLPVTGD VLFPGLSSDE PLPMVDAAIL KLFLQLKIKE
101: GLELELLGKK LVVITGHSTG GALAAFTALW LLSQSSPPSF RVFCITFGSP LLGNQSLSTS ISRSRLAHNF CHVVSIHDLV PRSSNEQFWP FGTYLFCSDK
201: GGVCLDNAGS VRLMFNILNT TATQNTEEHQ RYGHYVFTLS HMFLKSRSFL GGSIPDNSYQ AGVALAVEAL GFSNDDTSGV LVKECIETAT RIVRAPILRS
301: AELANELASV LPARLEIQWY KDRCDASEEQ LGYYDFFKRY SLKRDFKVNM SRIRLAKFWD TVIKMVETNE LPFDFHLGKK WIYASQFYQL LAEPLDIANF
401: YKNRDIKTGG HYLEGNRPKR YEVIDKWQKG VKVPEECVRS RYASTTQDTC FWAKLEQAKE WLDEARKESS DPQRRSLLRE KIVPFESYAN TLVTKKEVSL
501: DVKAKNSSYS VWEANLKEFK CKMGYENEIE MVVDESDAME T
101: GLELELLGKK LVVITGHSTG GALAAFTALW LLSQSSPPSF RVFCITFGSP LLGNQSLSTS ISRSRLAHNF CHVVSIHDLV PRSSNEQFWP FGTYLFCSDK
201: GGVCLDNAGS VRLMFNILNT TATQNTEEHQ RYGHYVFTLS HMFLKSRSFL GGSIPDNSYQ AGVALAVEAL GFSNDDTSGV LVKECIETAT RIVRAPILRS
301: AELANELASV LPARLEIQWY KDRCDASEEQ LGYYDFFKRY SLKRDFKVNM SRIRLAKFWD TVIKMVETNE LPFDFHLGKK WIYASQFYQL LAEPLDIANF
401: YKNRDIKTGG HYLEGNRPKR YEVIDKWQKG VKVPEECVRS RYASTTQDTC FWAKLEQAKE WLDEARKESS DPQRRSLLRE KIVPFESYAN TLVTKKEVSL
501: DVKAKNSSYS VWEANLKEFK CKMGYENEIE MVVDESDAME T
Arabidopsis Description
PAD4Lipase-like PAD4 [Source:UniProtKB/Swiss-Prot;Acc:Q9S745]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.