Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 6
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29080 | Canola | extracellular | 90.77 | 84.29 |
| CDY23217 | Canola | plastid | 23.08 | 3.49 |
| CDY67344 | Canola | plastid | 23.08 | 3.49 |
| CDY69054 | Canola | cytosol | 23.08 | 3.39 |
| CDY68190 | Canola | cytosol | 15.38 | 3.15 |
| CDY09901 | Canola | cytosol, endoplasmic reticulum, nucleus | 16.92 | 2.86 |
| CDX78091 | Canola | cytosol, nucleus, peroxisome | 23.08 | 2.74 |
| CDX70582 | Canola | cytosol | 21.54 | 2.7 |
| CDX73637 | Canola | cytosol, nucleus, peroxisome | 21.54 | 2.55 |
| CDY29081 | Canola | cytosol, endoplasmic reticulum, peroxisome | 21.54 | 2.55 |
| CDX70584 | Canola | cytosol | 20.0 | 2.47 |
| CDX70581 | Canola | cytosol | 20.0 | 2.47 |
| CDX78600 | Canola | extracellular | 20.0 | 2.43 |
| CDX78601 | Canola | nucleus | 18.46 | 2.39 |
| CDX90603 | Canola | plasma membrane | 23.08 | 2.38 |
| CDY09899 | Canola | extracellular, vacuole | 18.46 | 2.21 |
| CDY69990 | Canola | endoplasmic reticulum | 18.46 | 2.12 |
| CDX83034 | Canola | cytosol, extracellular, plastid | 16.92 | 2.09 |
| CDX68479 | Canola | cytosol, extracellular, plastid | 15.38 | 1.9 |
| CDX83035 | Canola | cytosol | 15.38 | 1.72 |
| CDX68481 | Canola | cytosol | 12.31 | 1.58 |
| CDY44979 | Canola | cytosol | 13.85 | 1.5 |
| CDY68128 | Canola | cytosol | 13.85 | 1.5 |
Protein Annotations
| EnsemblPlants:CDY00844 | EnsemblPlantsGene:GSBRNA2T00110778001 | GO:A0A078EJ92 | InterPro:OEP7-like | PANTHER:PTHR33982 | PANTHER:PTHR33982:SF1 |
| ProteinID:CDY00844 | ProteinID:CDY00844.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE4C75 | MapMan:35.2 |
Description
BnaCnng00440D
Coordinates
chrLK031922:+:586970..587167
Molecular Weight (calculated)
6701.9 Da
IEP (calculated)
6.716
GRAVY (calculated)
0.069
Length
65 amino acids
Sequence
(BLAST)
(BLAST)
1: MGKASGAKQA TVVVAALAFG WLAIEIAFKP FLDKLRSSID KSNPAKDPDD SDKDAAFAAA AAASY
1: MGKTSGAKQA TVVVAAMALG WLAIEIAFKP FLDKFRSSID KSDPTKDPDD FDTAATATTS KEGL
Arabidopsis Description
OEP7OEP7 [Source:UniProtKB/TrEMBL;Acc:A0A178VGL9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.