Factsheet for HORVU4Hr1G043530.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G060060.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G52430.1	HORVU5Hr1G060060.2	AT3G48090.1	11574472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G216100.1	Wheat	peroxisome	87.64	94.78
TraesCS4D01G096400.2	Wheat	peroxisome	79.69	86.04
TraesCS4B01G100100.1	Wheat	peroxisome	79.4	85.74
Os11t0195500-01	Rice	mitochondrion	52.98	69.72
Zm00001d004706_P002	Maize	cytosol, peroxisome, plastid	63.78	68.97
Zm00001d053138_P002	Maize	cytosol, peroxisome, plastid	64.49	68.89
EES08158	Sorghum	cytosol, peroxisome, plastid	64.35	67.61
GSMUA_Achr6P12900_001	Banana	cytosol	41.62	48.59
GSMUA_Achr2P20660_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	38.35	44.26
PGSC0003DMT400051170	Potato	cytosol	33.52	40.83
VIT_07s0031g02390.t01	Wine grape	cytosol	35.23	40.06
Solyc02g032850.2.1	Tomato	cytosol	32.81	39.97
CDY23217	Canola	plastid	23.58	38.6
Bra033431.1-P	Field mustard	plastid	23.58	38.6
KRH53943	Soybean	cytosol, nucleus, peroxisome	34.52	38.39
CDY67344	Canola	plastid	23.44	38.37
KRH63997	Soybean	cytosol, nucleus, peroxisome	34.09	37.91
KRH40959	Soybean	cytosol	33.52	37.28
CDY69054	Canola	cytosol	22.59	35.97
CDY68190	Canola	cytosol	15.77	35.02
AT3G52430.1	Thale cress	cytosol, nucleus, peroxisome	26.56	34.57
KRH59603	Soybean	plastid	25.43	34.23
CDX78091	Canola	cytosol, nucleus, peroxisome	26.56	34.19
Bra006922.1-P	Field mustard	cytosol, nucleus, peroxisome	26.56	34.19
CDX73637	Canola	cytosol, nucleus, peroxisome	26.56	34.12
CDY29081	Canola	cytosol, endoplasmic reticulum, peroxisome	26.56	34.06
CDX90603	Canola	plasma membrane	26.85	30.0
Bra012805.1-P	Field mustard	plasma membrane	26.85	30.0
HORVU5Hr1G060060.2	Barley	plastid	20.45	21.75

Protein Annotations

EnsemblPlants:HORVU4Hr1G043530.1	EnsemblPlantsGene:HORVU4Hr1G043530	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:Fungal_lipase-like	InterPro:IPR029058
PANTHER:PTHR21493	PANTHER:PTHR21493:SF130	PFAM:PF01764	SEG:seg	SUPFAM:SSF53474	UniParc:UPI000B478FF4
UniProt:A0A287NWA7	MapMan:26.8.2.4.2	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:347382682..347386705

Molecular Weight (calculated)

76623.9 Da

IEP (calculated)

8.512

GRAVY (calculated)

-0.118

Length

704 amino acids

Sequence
(BLAST)

001: LIEIAAPRPV RLRAPTTSQQ RRPRKINLTT SSPTTLEPFS PAPPHFREAR SSAMEDAEEN SMFETSHVLG ALLASSPLLA RAWDRCVAAA AMGAASSGFA
101: HGDGGGDGGT VYVAFSGLQA ALSVAGPAVA SGADVFAPVG LAGDAAGARA FPQLAAAEPD AAAAVERVAV QALALRCFLK LCGSPEFQML LNQIRGKAVV
201: FTGHSLGGAI AALAALHYLC ITSLSSPCSP SPPVLCVTFG SPLLGNEALS RAILRERWGG NFCNVVSQHD VVPRLLFCPL DAVPVHVIIG MQLQQWAGHT
301: HNTGVMTTRV VDAEQEGLRQ LIQAHVRMVA MEQKLVDPES RGGSPYRPFG AYVLCSPEGA VCVDNSTAAV QMLYATFVAC YAQGDTTSLG AAHSCYGDLV
401: LKMPQNLLLK RRPRAMDVLA SMSNSNYDAG ISLAMEASGI GSEAMEATMT RYWLKASKRA GRSPSLNCAG LAIRLGRITP CRAQVEWYKA SFDGNMGYYD
501: AFKQRRSPKK FNKADMCRIK LGQFWDGVLA MLDNSQLPHD FHRRAKWVNA ARFYQLLVEP LDIAHYHRNN LHRTRGGYIT HGRDRRYELF DKWWKEKGAF
601: TGTSTGDMAA TARSKYAGLT QDPCFWARVE EARDQTESAQ AEQDVAMLAM KLGRLREFER YARELVEGKE VSIDVLAPQS SYTLWVEEWK KLLLRDEARA
701: ASLF

Best Arabidopsis Sequence Match ( AT3G52430.1 )
(BLAST)

001: MDDCRFETSE LQASVMISTP LFTDSWSSCN TANCNGSIKI HDIAGITYVA IPAVSMIQLG NLVGLPVTGD VLFPGLSSDE PLPMVDAAIL KLFLQLKIKE
101: GLELELLGKK LVVITGHSTG GALAAFTALW LLSQSSPPSF RVFCITFGSP LLGNQSLSTS ISRSRLAHNF CHVVSIHDLV PRSSNEQFWP FGTYLFCSDK
201: GGVCLDNAGS VRLMFNILNT TATQNTEEHQ RYGHYVFTLS HMFLKSRSFL GGSIPDNSYQ AGVALAVEAL GFSNDDTSGV LVKECIETAT RIVRAPILRS
301: AELANELASV LPARLEIQWY KDRCDASEEQ LGYYDFFKRY SLKRDFKVNM SRIRLAKFWD TVIKMVETNE LPFDFHLGKK WIYASQFYQL LAEPLDIANF
401: YKNRDIKTGG HYLEGNRPKR YEVIDKWQKG VKVPEECVRS RYASTTQDTC FWAKLEQAKE WLDEARKESS DPQRRSLLRE KIVPFESYAN TLVTKKEVSL
501: DVKAKNSSYS VWEANLKEFK CKMGYENEIE MVVDESDAME T

Arabidopsis Description

PAD4Lipase-like PAD4 [Source:UniProtKB/Swiss-Prot;Acc:Q9S745]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.