Factsheet for Bra033774.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
extracellular 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra006922.1-P
Bra012805.1-P
Bra018085.1-P
Bra033431.1-P
Bra033774.1-P
Bra033775.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48090.1	Bra018085.1-P	AT3G48090.1	11574472
AT3G48090.1	Bra033774.1-P	AT3G48090.1	11574472
AT3G48090.1	Bra033775.1-P	AT3G48090.1	11574472
AT3G48090.1	Bra006922.1-P	AT3G52430.1	11574472
AT3G48090.1	Bra012805.1-P	AT3G52430.1	11574472
AT3G48090.1	Bra033431.1-P	AT3G52430.1	11574472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83034	Canola	cytosol, extracellular, plastid	86.15	96.96
CDX68479	Canola	cytosol, extracellular, plastid	82.6	92.97
Bra018085.1-P	Field mustard	cytosol	73.14	72.17
Bra033775.1-P	Field mustard	cytosol	68.75	67.83
AT3G48090.1	Thale cress	cytosol	62.16	59.07
AT3G48080.1	Thale cress	cytosol	62.16	58.51
PGSC0003DMT400083030	Potato	cytosol	40.54	41.03
Solyc06g071280.2.1	Tomato	cytosol	39.86	39.2
KRH63455	Soybean	cytosol	40.2	38.89
VIT_17s0000g07560.t01	Wine grape	cytosol	38.34	38.09
KRH54468	Soybean	cytosol	38.51	36.95
KRH54464	Soybean	cytosol, endoplasmic reticulum	38.51	36.77
KRH54465	Soybean	cytosol	36.82	35.45
Os09t0392100-01	Rice	cytosol, nucleus, peroxisome, plastid	37.16	35.43
VIT_17s0000g07370.t01	Wine grape	cytosol	35.3	34.83
TraesCS5B01G200800.2	Wheat	cytosol, nucleus, peroxisome, plastid	34.46	34.81
KXG35573	Sorghum	cytosol, nucleus, peroxisome	35.81	34.64
TraesCS5D01G208600.1	Wheat	plastid	36.32	34.51
TraesCS5A01G202200.2	Wheat	cytosol, nucleus, peroxisome, plastid	36.15	34.29
Zm00001d005708_P001	Maize	cytosol, nucleus, peroxisome, plastid	35.64	34.09
GSMUA_Achr8P25290_001	Banana	plastid	36.66	33.75
VIT_17s0000g07420.t01	Wine grape	cytosol	35.81	33.28
HORVU5Hr1G060060.2	Barley	plastid	36.99	33.08
Bra033431.1-P	Field mustard	plastid	16.89	23.26
VIT_17s0000g07400.t01	Wine grape	plastid	25.68	22.69
Bra006274.1-P	Field mustard	nucleus	17.57	20.76
Bra008729.1-P	Field mustard	cytosol	18.07	20.34
Bra006922.1-P	Field mustard	cytosol, nucleus, peroxisome	18.07	19.56
Bra012805.1-P	Field mustard	plasma membrane	18.75	17.62
Bra008731.1-P	Field mustard	extracellular, plasma membrane, vacuole	17.91	14.89

Protein Annotations

EnsemblPlants:Bra033774.1	EnsemblPlants:Bra033774.1-P	EnsemblPlantsGene:Bra033774	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:Fungal_lipase-like
InterPro:IPR029058	PANTHER:PTHR21493	PANTHER:PTHR21493:SF94	PFAM:PF01764	SEG:seg	SUPFAM:SSF53474
UniParc:UPI0002543D6B	UniProt:M4EY83	MapMan:26.8.2.4.1	:	:	:

Description

AT3G48080 (E=1e-185) | lipase class 3 family protein / disease resistance protein-related

Coordinates

chrA01:-:14345604..14347660

Molecular Weight (calculated)

67248.7 Da

IEP (calculated)

7.071

GRAVY (calculated)

-0.424

Length

592 amino acids

Sequence
(BLAST)

001: MVLEALAGVS NALIATSWRA STTAYSTDHF HIEVEGDTVF FAFKPSFLVK DWFDPENASP FGETKMNREQ FPCMRSIGND VNATVNEAFL KNLKLLASTS
101: FPHSVKTVVD SMRSQRIVFT GHSSGGATAI LATVWYLETY FTKQSGFFPE PLCLTFGAPL VGDSVFKHAL GRENWSRFFV NFVTRFDIVP RIMLARKAST
201: KQALPYALSQ LGRKSGNQGN DQSITGFFAT VMKDTATVAH QAVCKLIGNG EPFLKTLSSF LELSPYRPAG TFVFSTGTRL VSVSNSDAIL QILLYSSQSS
301: NEQELSLRPH QSIRDHHSYE EMVHSMAMKV VNQLDLQHLP LDGGESALSD LGLSTRARQC VRAAFEAEKK QVNNQSKIDA KQPTILEKLV WIEDEYKPKC
401: LTHKIGYYDS FKESNEEKDF RANVKRAELA GIYDEVLGLV KEGQLPDGFE GRIEWIELAN RYRRLIEPLD ISNYHRHLKN EDTGPYMIHG RPNRYKHAQR
501: GYEHELLKAG RSAEEIKRSD CGSCFWAEVE ELRRKEYDEA RVTKLEELLE GWIRDKEVDD EHIFLEGSSF RKWWHSLPEV HRRGSSLQVR MG

Best Arabidopsis Sequence Match ( AT3G48080.1 )
(BLAST)

001: MAFEALTGVN GDLVTISWMA SKGANQTEHY LKEEVGGTVF FAFRASFSSE DLFATENTSP FGEIKMKRNQ FPCMRSIGND VDTTVNEAFL KSLEVLIGPR
101: TSFHASVQSA VDRKQQVVFT GHSFGGATAI LATVWYLETY FIRDAYAAPE PRCVTFGAPL VGDYIFKHAL GRENWSRFFV NFVTRFDIVP RIMLARKTTI
201: EQTLSYVLGK LDSTRAPIHE SDQVITEFYT RVMRDTYTVA SKAVCQLIGN GEAFLETLSS FYELSPYRPV GTFVFSTQKR LVVVNNSDAI LQMLFYTCQS
301: NDEQELSVIP FLSIRDHHGY EELVQSIGIK LLNHLDLHNP LLDGENSIGS ALDDLGMSTR ARQCIHAALE AEKQRVENQK KIETKRDQIV ERLTWIVEVY
401: KPKCQAHKNG YYDSFKDSNE ENDFKANVKR VELAGIFDEV LGLVKKGQLP DGFEGSRGWI NLATQYRRLI EPLDISNYHG QLKNEDTGPY MLHGRPSRYK
501: YAQRGYEHDI LKPTGMIAKD VFWSKVNGLN LGLQQDIQEI LKNSGSECGS CFWAEVEELK GKPYEEVQVR FKTLEGLLEG WIKDGEVDEK EIFLEGSTFR
601: KWWNTLPDSH KIHAPLYPRE RMMDETRAT

Arabidopsis Description

EDS1BProtein EDS1B [Source:UniProtKB/Swiss-Prot;Acc:Q9SU71]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.