CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH40959
KRH53943
KRH54464
KRH54465
KRH54468
KRH59603
KRH63455
KRH63997

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48090.1	KRH54464	AT3G48090.1	11574472
AT3G48090.1	KRH54465	AT3G48090.1	11574472
AT3G48090.1	KRH54468	AT3G48090.1	11574472
AT3G48090.1	KRH63455	AT3G48090.1	11574472
AT3G48090.1	KRH40959	AT3G52430.1	11574472
AT3G48090.1	KRH53943	AT3G52430.1	11574472
AT3G48090.1	KRH59603	AT3G52430.1	11574472
AT3G48090.1	KRH63997	AT3G52430.1	11574472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54468	Soybean	cytosol	59.51	59.32
KRH63455	Soybean	cytosol	57.72	58.01
KRH54464	Soybean	cytosol, endoplasmic reticulum	54.47	54.03
VIT_17s0000g07560.t01	Wine grape	cytosol	47.48	48.99
PGSC0003DMT400083030	Potato	cytosol	45.85	48.21
Solyc06g071280.2.1	Tomato	cytosol	44.88	45.85
VIT_17s0000g07370.t01	Wine grape	cytosol	43.41	44.5
VIT_17s0000g07420.t01	Wine grape	cytosol	44.88	43.33
GSMUA_Achr8P25290_001	Banana	plastid	39.84	38.1
TraesCS5B01G200800.2	Wheat	cytosol, nucleus, peroxisome, plastid	35.77	37.54
Bra033775.1-P	Field mustard	cytosol	36.59	37.5
TraesCS5A01G202200.2	Wheat	cytosol, nucleus, peroxisome, plastid	38.05	37.5
KXG35573	Sorghum	cytosol, nucleus, peroxisome	37.24	37.42
TraesCS5D01G208600.1	Wheat	plastid	37.89	37.4
Zm00001d005708_P001	Maize	cytosol, nucleus, peroxisome, plastid	37.56	37.32
CDX83034	Canola	cytosol, extracellular, plastid	31.54	36.88
Bra033774.1-P	Field mustard	cytosol	35.45	36.82
Os09t0392100-01	Rice	cytosol, nucleus, peroxisome, plastid	36.91	36.55
CDY44979	Canola	cytosol	35.61	36.5
CDX83035	Canola	cytosol	34.31	36.38
Bra018085.1-P	Field mustard	cytosol	35.12	36.0
CDX68479	Canola	cytosol, extracellular, plastid	30.73	35.93
CDY68128	Canola	cytosol	34.96	35.83
HORVU5Hr1G060060.2	Barley	plastid	37.72	35.05
AT3G48090.1	Thale cress	cytosol	34.96	34.51
AT3G48080.1	Thale cress	cytosol	34.96	34.18
CDX68481	Canola	cytosol	27.8	33.86
VIT_17s0000g07400.t01	Wine grape	plastid	33.33	30.6
KRH59603	Soybean	plastid	18.37	21.61
KRH40959	Soybean	cytosol	21.63	21.01
KRG93398	Soybean	cytosol	5.85	20.93
KRH53943	Soybean	cytosol, nucleus, peroxisome	20.65	20.06
KRH63997	Soybean	cytosol, nucleus, peroxisome	20.33	19.75
KRH18587	Soybean	endoplasmic reticulum, nucleus	17.07	18.04
KRH18578	Soybean	cytosol	10.73	17.65
KRG93399	Soybean	plastid	16.26	17.04
KRH18585	Soybean	mitochondrion	14.47	16.73

Protein Annotations

EntrezGene:100820237	MapMan:26.8.2.4.1	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	EMBL:ACUP02003525	ncoils:Coil
InterPro:Fungal_lipase-like	EnsemblPlantsGene:GLYMA_06G187300	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	UniProt:I1KCL7	InterPro:IPR029058	EnsemblPlants:KRH54465	ProteinID:KRH54465
ProteinID:KRH54465.1	PFAM:PF01764	PANTHER:PTHR21493	PANTHER:PTHR21493:SF94	SUPFAM:SSF53474	UniParc:UPI0002339448
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:16309615..16312963

Molecular Weight (calculated)

70405.3 Da

IEP (calculated)

6.269

GRAVY (calculated)

-0.385

Length

615 amino acids

Sequence
(BLAST)

001: MAVGSLGDNI GLKEEFITNV CGLAFQANMS PENLYHFHEI EIFSEIYHVF SFSGSWNPHE WLVNNKPFGE TKIDHALFPS LRSIGNDEAA LVNEGFAKRF
101: DLILKTSSIK SEVNKAMVDG KQVVFTGHSS GAAIAILATF WALEEYLNPT KPQNLKHPFC VTFGSPLIGN HIFSHSSRRE NWSHYFIHFV LRYDIVPRIL
201: LAPFSSVGQT FSSILQILDP NFETSTQDPT RNCVISQFYS TVMTNAATVT SHAAGILMGS TNMLLETVTN FVDLSPYRPF GTYVFCNGNG QLIVVKNSDA
301: VLQLLFHTAQ LSNFAELEEV ANNSILQHLN YVAELQESLG MQNVVYLEQL EQLPLSADGS NSDVATALDG LGLSPRARLC LRAAANLATR KLDNEDKIKQ
401: KKVFIEQKMK DLKKYREMWE HQNVGFYDGF REHKKKEDFK ANVTRLELAS VWDEIMEKLR SYQLPDEFEG NKEWVDLGSR FRQLMEPLDI ANYYRHARHY
501: EDGSSSYMLR GRPKRYRYTQ KWLEHAERRP QEPSSTSCFW AEVEDLRYKT SYSNSSSFED VKERVEQLEA QLQAWSEKGE LANDVFLEGS TLVKWWKTLP
601: LQHKQQSCIR NLINE

Best Arabidopsis Sequence Match ( AT3G48090.2 )
(BLAST)

001: MAVRSRKQIV FTGHSSGGAT AILATVWYLE KYFIRNPNVY LEPRCVTFGA PLVGDSIFSH ALGREKWSRF FVNFVSRFDI VPRIMLARKA SVEETLPHVL
101: AQLDPRKSSV QESEQRITEF YTRVMRDTST VANQAVCELT GSAEAFLETL SSFLELSPYR PAGTFVFSTE KRLVAVNNSD AILQMLFYTS QASDEQEWSL
201: IPFRSIRDHH SYEELVQSMG KKLFNHLDGE NSIESTLNDL GVSTRGRQYV QAALEEEKKR VENQKKIIQV IEQERFLKKL AWIEDEYKPK CQAHKNGYYD
301: SFKVSNEEND FKANVKRAEL AGVFDEVLGL MKKCQLPDEF EGDIDWIKLA TRYRRLVEPL DIANYHRHLK NEDTGPYMKR GRPTRYIYAQ RGYEHYILKP
401: NGMIAEDVFW NKVNGLNLGL QLEEIQETLK NSGSECGSCF WAEVEELKGK PYEEVEVRVK TLEGMLGEWI TDGEVDDKEI FLEGSTFRKW WITLPKNHKS
501: HSPLRDYMMD EITDT

Arabidopsis Description

EDS1Protein EDS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU72]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.