Factsheet for GSMUA_Achr8P25290_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
extracellular 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr2P20660_001
GSMUA_Achr6P12900_001
GSMUA_Achr8P25290_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48090.1	GSMUA_Achr8P25290_001	AT3G48090.1	11574472
AT3G48090.1	GSMUA_Achr2P20660_001	AT3G52430.1	11574472
AT3G48090.1	GSMUA_Achr6P12900_001	AT3G52430.1	11574472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G200800.2	Wheat	cytosol, nucleus, peroxisome, plastid	43.86	48.12
KXG35573	Sorghum	cytosol, nucleus, peroxisome	45.41	47.71
TraesCS5D01G208600.1	Wheat	plastid	46.03	47.51
TraesCS5A01G202200.2	Wheat	cytosol, nucleus, peroxisome, plastid	46.03	47.44
Zm00001d005708_P001	Maize	cytosol, nucleus, peroxisome, plastid	44.95	46.69
PGSC0003DMT400083030	Potato	cytosol	42.46	46.67
Os09t0392100-01	Rice	cytosol, nucleus, peroxisome, plastid	44.79	46.38
VIT_17s0000g07560.t01	Wine grape	cytosol	42.3	45.64
HORVU5Hr1G060060.2	Barley	plastid	45.88	44.56
Solyc06g071280.2.1	Tomato	cytosol	41.68	44.52
VIT_17s0000g07370.t01	Wine grape	cytosol	37.79	40.5
KRH63455	Soybean	cytosol	38.41	40.36
KRH54465	Soybean	cytosol	38.1	39.84
KRH54468	Soybean	cytosol	37.79	39.38
VIT_17s0000g07420.t01	Wine grape	cytosol	38.57	38.93
CDX68479	Canola	cytosol, extracellular, plastid	31.26	38.21
CDX83034	Canola	cytosol, extracellular, plastid	31.1	38.02
KRH54464	Soybean	cytosol, endoplasmic reticulum	36.55	37.9
Bra033774.1-P	Field mustard	cytosol	33.75	36.66
CDY44979	Canola	cytosol	34.06	36.5
Bra018085.1-P	Field mustard	cytosol	33.59	36.0
CDY68128	Canola	cytosol	33.28	35.67
AT3G48090.1	Thale cress	cytosol	33.59	34.67
AT3G48080.1	Thale cress	cytosol	33.44	34.18
Bra033775.1-P	Field mustard	cytosol	31.88	34.17
CDX83035	Canola	cytosol	28.77	31.9
CDX68481	Canola	cytosol	23.79	30.3
VIT_17s0000g07400.t01	Wine grape	plastid	26.91	25.82
GSMUA_Achr6P12900_001	Banana	cytosol	22.71	24.21
GSMUA_Achr2P20660_001	Banana	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	22.86	24.1

Protein Annotations

EnsemblPlants:GSMUA_Achr8P25290_001	EnsemblPlants:GSMUA_Achr8T25290_001	EnsemblPlantsGene:GSMUA_Achr8G25290_001	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:Fungal_lipase-like
InterPro:IPR029058	PANTHER:PTHR21493	PANTHER:PTHR21493:SF94	PFAM:PF01764	SEG:seg	SUPFAM:SSF53474
UniParc:UPI000294CC9C	UniProt:M0TTI2	MapMan:26.8.2.4.1	:	:	:

Description

lipase, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G25290_001]

Coordinates

chr8:-:29160723..29163186

Molecular Weight (calculated)

72750.2 Da

IEP (calculated)

6.986

GRAVY (calculated)

-0.132

Length

643 amino acids

Sequence
(BLAST)

001: MALIPLCCSL SMAAHLSPSS PFLRHDNSAP SAAIFAFRAS WSADDWLLAG TGSPFGEREI DAALFPWIKS VGNDTTAAVN GAFLRSFKKV LDTSRLQAEM
101: VGLHLTKLKP PIRCVHAAVA DKKQIVFTGH SSGGSIAVLA AIWFLEQRQN FEGRGGQVDP FCVTFGSPLV GDGVFVHALQ RENWARFFLH FVMAADIIPR
201: CLLAPLSSFK DELEAILGFL CPKPLLFSPN TVMSSPVTYY RNVLGHALSV SNHQACLLMG CTNPLLEVLT GFVKLTPYRP VGAYVLCSRD GRLLCLRNSN
301: SILHMLFYLF QDVPGADVEE VAHRSLEAHR LYEAMTRDHL NVQNILSVDS SDSIPLTFTN GFDDKAQPVK TLLKDLDLSL EARLCLRAAA EWEKQRLRNQ
401: AKIDDNYSKI KEALSFLSDY RATCEVRGLG YYDTFKLQKD VEDFNANVKR LELAGLWDEI VEMLSRYELP DGFEGRQEWV KLGTQYRWLV EPLDIANYYR
501: HSKNEDTGPY MVKGRPRRYR YTQRWLEHAE RSPAGTCTES CFWASVEELC IDTGDGKPFL ELRSRVVELE REVLRWVTKG SLGRDVFVSE STFARWWVTL
601: PRQHRADSCI ARFVNGEDIN LTAITITQTI RHDHIFKWFD LNL

Best Arabidopsis Sequence Match ( AT3G48090.1 )
(BLAST)

001: MAFEALTGIN GDLITRSWSA SKQAYLTERY HKEEAGAVVI FAFQPSFSEK DFFDPDNKSS FGEIKLNRVQ FPCMRKIGKG DVATVNEAFL KNLEAIIDPR
101: TSFQASVEMA VRSRKQIVFT GHSSGGATAI LATVWYLEKY FIRNPNVYLE PRCVTFGAPL VGDSIFSHAL GREKWSRFFV NFVSRFDIVP RIMLARKASV
201: EETLPHVLAQ LDPRKSSVQE SEQRITEFYT RVMRDTSTVA NQAVCELTGS AEAFLETLSS FLELSPYRPA GTFVFSTEKR LVAVNNSDAI LQMLFYTSQA
301: SDEQEWSLIP FRSIRDHHSY EELVQSMGKK LFNHLDGENS IESTLNDLGV STRGRQYVQA ALEEEKKRVE NQKKIIQVIE QERFLKKLAW IEDEYKPKCQ
401: AHKNGYYDSF KVSNEENDFK ANVKRAELAG VFDEVLGLMK KCQLPDEFEG DIDWIKLATR YRRLVEPLDI ANYHRHLKNE DTGPYMKRGR PTRYIYAQRG
501: YEHYILKPNG MIAEDVFWNK VNGLNLGLQL EEIQETLKNS GSECGSCFWA EVEELKGKPY EEVEVRVKTL EGMLGEWITD GEVDDKEIFL EGSTFRKWWI
601: TLPKNHKSHS PLRDYMMDEI TDT

Arabidopsis Description

EDS1Protein EDS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU72]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.