Factsheet for Solyc06g071280.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g032850.2.1
Solyc06g071280.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48090.1	Solyc06g071280.2.1	AT3G48090.1	11574472
AT3G48090.1	Solyc02g032850.2.1	AT3G52430.1	11574472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400083030	Potato	cytosol	86.88	89.4
VIT_17s0000g07560.t01	Wine grape	cytosol	51.16	51.68
KRH63455	Soybean	cytosol	47.84	47.06
KRH54464	Soybean	cytosol, endoplasmic reticulum	47.01	45.65
KRH54468	Soybean	cytosol	46.35	45.22
KRH54465	Soybean	cytosol	45.85	44.88
VIT_17s0000g07370.t01	Wine grape	cytosol	44.35	44.5
VIT_17s0000g07420.t01	Wine grape	cytosol	44.68	42.23
GSMUA_Achr8P25290_001	Banana	plastid	44.52	41.68
TraesCS5A01G202200.2	Wheat	cytosol, nucleus, peroxisome, plastid	43.19	41.67
TraesCS5D01G208600.1	Wheat	plastid	43.02	41.57
TraesCS5B01G200800.2	Wheat	cytosol, nucleus, peroxisome, plastid	40.37	41.47
Os09t0392100-01	Rice	cytosol, nucleus, peroxisome, plastid	41.69	40.42
KXG35573	Sorghum	cytosol, nucleus, peroxisome	40.86	40.2
CDX83034	Canola	cytosol, extracellular, plastid	34.88	39.92
Bra033774.1-P	Field mustard	cytosol	39.2	39.86
HORVU5Hr1G060060.2	Barley	plastid	43.19	39.27
Zm00001d005708_P001	Maize	cytosol, nucleus, peroxisome, plastid	40.2	39.1
CDX68479	Canola	cytosol, extracellular, plastid	34.05	38.97
AT3G48090.1	Thale cress	cytosol	39.87	38.52
CDY44979	Canola	cytosol	38.21	38.33
Bra018085.1-P	Field mustard	cytosol	37.87	38.0
CDY68128	Canola	cytosol	37.38	37.5
Bra033775.1-P	Field mustard	cytosol	37.38	37.5
AT3G48080.1	Thale cress	cytosol	39.04	37.36
CDX83035	Canola	cytosol	34.72	36.03
CDX68481	Canola	cytosol	28.07	33.47
VIT_17s0000g07400.t01	Wine grape	plastid	32.56	29.25
Solyc02g032850.2.1	Tomato	cytosol	24.09	25.09
Solyc02g067660.2.1	Tomato	plastid	17.94	19.05
Solyc02g069400.2.1	Tomato	extracellular, nucleus, peroxisome	17.61	18.24

Protein Annotations

EnsemblPlants:Solyc06g071280.2.1	EnsemblPlantsGene:Solyc06g071280.2	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:Fungal_lipase-like	InterPro:IPR029058
ncoils:Coil	PANTHER:PTHR21493	PANTHER:PTHR21493:SF94	PFAM:PF01764	ProteinID:AAX73302.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI00004F955F	UniProt:Q56R03	MapMan:26.8.2.4.1	:	:

Description

EDS1 [Source:UniProtKB/TrEMBL;Acc:Q56R03]

Coordinates

chr6:-:43852757..43856103

Molecular Weight (calculated)

69043.3 Da

IEP (calculated)

7.494

GRAVY (calculated)

-0.396

Length

602 amino acids

Sequence
(BLAST)

001: MVKIGEGIEV RDELIKKTCN LTMEAHNLSP GKPYIYKKIN GSTDVVFAFA GTLSSDGWYS NTSFGEKEIN TTLFPSLRSV GTDEVAKVNE VFATRFEEIL
101: DKSSLKNEVE KAMLEGRQVV FAGHSSGGAI AILAALWCLE CCRTRPNGDM LLHPYCMTFG SPLVGNKIWS HALRRENWAR YFLHFVMKYD VVPRMMLAPL
201: SSIQELLQVI SPFINPKSQY YQHEAVARSS HASNFFMTVM RSASSVASYD ACNLKGCTNL LLETVSNIVQ LSPYRPFGTY IFCTGNRKLV VVENPDAVLQ
301: LLFYSSQLSS EAEAAVVVPR SLNDHLLYKN EMQDSLEMQD VLHLNNLTDI PLSSNVDPSM NSALNDLGLS TRARLCLRAA GEWEKQKKKN EEKIEQNKRS
401: IRDALSKIQE YQTKCDIRKV GYYDAFKIQN TDDDFNANVR RLELAGIWDE IIEMLKRYEL PDSFEGRRDW IELGTQFRRQ VEPLDIANYY RHLKNEDTGP
501: YLIRARPKRY RFTQRWLEHF DRVQAGARSE SCFWAEVEEL RNKPFAQVQD RVLNLETAAN GWIQSSLLGD DIFFPESTYT KWWKTLPPQH KQASWVSRKI
601: TP

Best Arabidopsis Sequence Match ( AT3G48090.1 )
(BLAST)

001: MAFEALTGIN GDLITRSWSA SKQAYLTERY HKEEAGAVVI FAFQPSFSEK DFFDPDNKSS FGEIKLNRVQ FPCMRKIGKG DVATVNEAFL KNLEAIIDPR
101: TSFQASVEMA VRSRKQIVFT GHSSGGATAI LATVWYLEKY FIRNPNVYLE PRCVTFGAPL VGDSIFSHAL GREKWSRFFV NFVSRFDIVP RIMLARKASV
201: EETLPHVLAQ LDPRKSSVQE SEQRITEFYT RVMRDTSTVA NQAVCELTGS AEAFLETLSS FLELSPYRPA GTFVFSTEKR LVAVNNSDAI LQMLFYTSQA
301: SDEQEWSLIP FRSIRDHHSY EELVQSMGKK LFNHLDGENS IESTLNDLGV STRGRQYVQA ALEEEKKRVE NQKKIIQVIE QERFLKKLAW IEDEYKPKCQ
401: AHKNGYYDSF KVSNEENDFK ANVKRAELAG VFDEVLGLMK KCQLPDEFEG DIDWIKLATR YRRLVEPLDI ANYHRHLKNE DTGPYMKRGR PTRYIYAQRG
501: YEHYILKPNG MIAEDVFWNK VNGLNLGLQL EEIQETLKNS GSECGSCFWA EVEELKGKPY EEVEVRVKTL EGMLGEWITD GEVDDKEIFL EGSTFRKWWI
601: TLPKNHKSHS PLRDYMMDEI TDT

Arabidopsis Description

EDS1Protein EDS1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU72]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.