Factsheet for PGSC0003DMT400061716

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular, cytosol

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 3
extracellular 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0077g00880.t01	Wine grape	extracellular	58.3	42.15
KRH51132	Soybean	extracellular	49.79	35.78
Bra022195.1-P	Field mustard	extracellular	50.21	34.91
CDX92114	Canola	extracellular	50.21	34.91
AT3G17070.1	Thale cress	endoplasmic reticulum, extracellular	50.21	34.81
CDX95885	Canola	extracellular	49.79	34.62
KRH02028	Soybean	extracellular	49.36	32.77
AT3G42570.1	Thale cress	cytosol	20.85	32.67
EES19262	Sorghum	extracellular	43.83	30.47
Zm00001d010409_P001	Maize	extracellular, nucleus, plasma membrane	46.38	30.28
PGSC0003DMT400004447	Potato	extracellular	33.62	24.38
PGSC0003DMT400027130	Potato	extracellular	33.62	24.01
PGSC0003DMT400042428	Potato	extracellular	33.19	23.93
PGSC0003DMT400051161	Potato	extracellular	8.94	15.0

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0020037	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	UniProt:M1C7W9	PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG400024019	PGSC:PGSC0003DMG400024019	EnsemblPlants:PGSC0003DMT400061716
PRINTS:PR00458	PRINTS:PR00461	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF15	InterPro:Peroxidase_pln
SUPFAM:SSF48113	UniParc:UPI000296D3F3	SEG:seg	:	:	:

Description

Peroxidase 29 [Source:PGSC_GENE;Acc:PGSC0003DMG400024019]

Coordinates

chr1:+:45907102..45909090

Molecular Weight (calculated)

25676.6 Da

IEP (calculated)

6.234

GRAVY (calculated)

-0.057

Length

235 amino acids

Sequence
(BLAST)

001: MRSSRNLGIR KREVVNLLKS VVEAQCPQQV SCADILILAA REAISVSGGP RIDVPLGRRD SSNPPNSSLA DSSLPPSNLG VNDMLQLFAQ IGLSLEESVA
101: INGAHTLGIT HCFSIESRLY DESKNDEPNE HEFELYLKLS CPKGSLTSNV SFVLNEPTTL TFDNHYFINA INGRGVLRID AEIPFHPLTA LYVQCFAADQ
201: DAFFKAFSSA FVKLSTYGVL TGSQGMIRRH CNALS

Best Arabidopsis Sequence Match ( AT3G17070.2 )
(BLAST)

001: MITPSIHTTN WTFRVRTCYV GCDASILLEP IRDQQFTELD SAKNFGIRKR DLVGSIKTSL ELECPKQVSC SDVIILAARD AVALTGGPLI SVPLGRKDSL
101: STPSKHVADS ELPPSTADVD TTLSLFANKG MTIEESVAIM GAHTIGVTHC NNVLSRFDNA NATSENMDPR FQTFLRVACP EFSPTSQAAE ATFVPNDQTS
201: VIFDTAYYDD AIAGRGNLRI DSEIGADPRT RPFVEAFAAD QDRFFNAFSS AFVKLSSYKV LTGNEGVIRS VCDKVD

Arabidopsis Description

PER29Peroxidase 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.