Factsheet for PGSC0003DMT400027130

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
nucleus 1
extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400075691

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37130.1	PGSC0003DMT400075691	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g084240.1.1	Tomato	extracellular	97.26	97.26
PGSC0003DMT400004447	Potato	extracellular	70.52	71.6
VIT_08s0040g02200.t01	Wine grape	extracellular	71.12	71.34
Bra023099.1-P	Field mustard	extracellular	65.65	65.45
CDY46756	Canola	extracellular	65.65	65.45
KRH19837	Soybean	extracellular	65.35	65.35
CDY55434	Canola	extracellular	65.05	65.24
CDX79717	Canola	extracellular	65.35	65.15
KRH32430	Soybean	extracellular	64.74	65.14
Bra017206.1-P	Field mustard	extracellular	64.44	64.63
AT2G37130.1	Thale cress	extracellular	63.22	63.61
GSMUA_Achr3P13770_001	Banana	extracellular	62.61	63.19
Os07t0694300-01	Rice	cytosol, extracellular	52.58	58.64
PGSC0003DMT400042428	Potato	extracellular	54.71	55.21
TraesCS2B01G098100.1	Wheat	extracellular	55.32	54.82
EES18091	Sorghum	extracellular	56.53	54.55
TraesCS2D01G082100.1	Wheat	extracellular	55.32	53.69
TraesCS2B01G098200.1	Wheat	extracellular	51.37	53.14
TraesCS2B01G098600.1	Wheat	extracellular	55.02	53.08
HORVU2Hr1G013740.1	Barley	extracellular	20.97	53.08
TraesCS2B01G098400.1	Wheat	extracellular	54.41	52.96
TraesCS2D01G081900.1	Wheat	extracellular	54.41	52.8
TraesCS2B01G098700.1	Wheat	extracellular	53.8	52.68
TraesCS2A01G083900.1	Wheat	plastid	55.93	47.92
TraesCS2A01G084100.1	Wheat	plastid	55.93	47.92
PGSC0003DMT400051161	Potato	extracellular	18.54	43.57
PGSC0003DMT400061716	Potato	cytosol, extracellular, mitochondrion, plastid	24.01	33.62

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:102605677	MapMan:35.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491
GO:GO:0020037	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:M1AP84	PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG400010465	PGSC:PGSC0003DMG400010465
EnsemblPlants:PGSC0003DMT400027130	PRINTS:PR00458	PRINTS:PR00461	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF11
InterPro:Peroxidase_pln	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000295FBDB
RefSeq:XP_006339298.1	:	:	:	:	:

Description

Peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400010465]

Coordinates

chr10:-:54851708..54854963

Molecular Weight (calculated)

37250.4 Da

IEP (calculated)

7.116

GRAVY (calculated)

-0.340

Length

329 amino acids

Sequence
(BLAST)

001: MATKTQHFGP SSTFITLFLV LLLHIHYAKS DLKLNYYSES CPRAEEIIKE QVNKLYHKHG NTAVSWIRNL FHDCMVKSCD ASILLDKTKE QTSEKTSQRN
101: FGMRNFKYIE TIKEALENEC PNIVSCADIV ALSARDGIVM LGGPQIEIKT GRWDSKDSYL AEVESFLPNH NDSMSLVLSR FNSVGVDTQG TVALLGAHTV
201: GRVHCVNIVH RLYPTVDPTL DPDFANYLKT RCPSPQPDPK AVEYARNDHI NPMVWDNLYY KNIMSNKGLL IVDQQLVSDP TTYPFVEKFA ANNSYFNDQF
301: AKSLIILSEN NPLSGDQGEI RKVCRHVNK

Best Arabidopsis Sequence Match ( AT2G37130.1 )
(BLAST)

001: MANAKPFCLL GFFCLLLQLF SIFHIGNGEL EMNYYKESCP KAEEIIRQQV ETLYYKHGNT AVSWLRNLFH DCVVKSCDAS LLLETARGVE SEQKSKRSFG
101: MRNFKYVKII KDALEKECPS TVSCADIVAL SARDGIVMLK GPKIEMIKTG RRDSRGSYLG DVETLIPNHN DSLSSVISTF NSIGIDVEAT VALLGAHSVG
201: RVHCVNLVHR LYPTIDPTLD PSYALYLKKR CPSPTPDPNA VLYSRNDRET PMVVDNMYYK NIMAHKGLLV IDDELATDPR TAPFVAKMAA DNNYFHEQFS
301: RGVRLLSETN PLTGDQGEIR KDCRYVN

Arabidopsis Description

PER21Peroxidase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q42580]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.