Factsheet for TraesCS2D01G082100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G099400.1
TraesCS3B01G115800.1
TraesCS3D01G099700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37130.1	TraesCS3A01G099400.1	AT2G01950.1	19000166
AT2G37130.1	TraesCS3B01G115800.1	AT2G01950.1	19000166
AT2G37130.1	TraesCS3D01G099700.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G098600.1	Wheat	extracellular	96.17	95.6
TraesCS2D01G081900.1	Wheat	extracellular	94.69	94.69
TraesCS2B01G098400.1	Wheat	extracellular	93.81	94.08
TraesCS2B01G098700.1	Wheat	extracellular	92.92	93.75
HORVU2Hr1G013740.1	Barley	extracellular	35.69	93.08
TraesCS2B01G098200.1	Wheat	extracellular	87.02	92.77
TraesCS2B01G098100.1	Wheat	extracellular	89.09	90.96
TraesCS2A01G084100.1	Wheat	plastid	92.04	81.25
TraesCS2A01G083900.1	Wheat	plastid	92.04	81.25
Os07t0694300-01	Rice	cytosol, extracellular	67.55	77.63
EES18091	Sorghum	extracellular	76.7	76.25
GSMUA_Achr3P13770_001	Banana	extracellular	59.0	61.35
VIT_08s0040g02200.t01	Wine grape	extracellular	59.0	60.98
CDX79717	Canola	extracellular	58.7	60.3
CDY46756	Canola	extracellular	58.41	60.0
Bra023099.1-P	Field mustard	extracellular	58.41	60.0
AT2G37130.1	Thale cress	extracellular	57.52	59.63
CDY55434	Canola	extracellular	57.23	59.15
KRH32430	Soybean	extracellular	56.93	59.02
Bra017206.1-P	Field mustard	extracellular	56.93	58.84
KRH19837	Soybean	extracellular	56.93	58.66
Solyc09g007520.2.1	Tomato	extracellular	55.46	58.02
PGSC0003DMT400004447	Potato	extracellular	54.28	56.79
Solyc10g084240.1.1	Tomato	extracellular	54.87	56.53
PGSC0003DMT400027130	Potato	extracellular	53.69	55.32

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0020037	GO:GO:0042744	GO:GO:0055114	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF11	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	SUPFAM:SSF48113
InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2D01G082100	EnsemblPlants:TraesCS2D01G082100.1	TIGR:cd00693
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:35315074..35316213

Molecular Weight (calculated)

36354.4 Da

IEP (calculated)

7.895

GRAVY (calculated)

-0.102

Length

339 amino acids

Sequence
(BLAST)

001: MGLSSSLVPV ASALLLFCCF TAWNAAAAAA SGGGGLRLNY YSESCPRAEE IVKEQVRRLY EEHGNTAVSW LRALFHDCTV KSCDASLLLE TDAATGLVSE
101: QASPRSFGMR NFKYVGAIKS ALERECPGTV SCADILALAT RDGAAMLGGP AAIPMRTGRR DATESQYGEV ERYIPNHNDT VSAVLSRFAA MGLGAEAVVA
201: LLGAHSVGRV HCSNLVARLY PAVDAGMEPA YGAYLRGRCP TADAREDTRD VAYARNDRAT PMVLDNMYHK NLLKGRGLLL VDQRLASDPR TAPFVRRMAA
301: DNGYFGETFA AALVRMSENG PLTGGQGEVR KDCRFVNAK

Best Arabidopsis Sequence Match ( AT2G37130.2 )
(BLAST)

001: MNYYKESCPK AEEIIRQQVE TLYYKHGNTA VSWLRNLFHD CVVKSCDASL LLETARGVES EQKSKRSFGM RNFKYVKIIK DALEKECPST VSCADIVALS
101: ARDGIVMLKG PKIEMIKTGR RDSRGSYLGD VETLIPNHND SLSSVISTFN SIGIDVEATV ALLGAHSVGR VHCVNLVHRL YPTIDPTLDP SYALYLKKRC
201: PSPTPDPNAV LYSRNDRETP MVVDNMYYKN IMAHKGLLVI DDELATDPRT APFVAKMAAD NNYFHEQFSR GVRLLSETNP LTGDQGEIRK DCRYVN

Arabidopsis Description

PER21Peroxidase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q42580]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.