Factsheet for VIT_08s0040g02200.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
nucleus 1
mitochondrion 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0011g06410.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37130.1	VIT_01s0011g06410.t01	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g007520.2.1	Tomato	extracellular	72.87	73.77
PGSC0003DMT400004447	Potato	extracellular	71.95	72.84
KRH32430	Soybean	extracellular	72.26	72.48
KRH19837	Soybean	extracellular	72.26	72.04
Solyc10g084240.1.1	Tomato	extracellular	71.34	71.12
PGSC0003DMT400027130	Potato	extracellular	71.34	71.12
CDY55434	Canola	extracellular	71.04	71.04
Bra017206.1-P	Field mustard	extracellular	70.73	70.73
CDY46756	Canola	extracellular	71.04	70.61
Bra023099.1-P	Field mustard	extracellular	71.04	70.61
AT2G37130.1	Thale cress	extracellular	70.12	70.34
CDX79717	Canola	extracellular	70.73	70.3
GSMUA_Achr3P13770_001	Banana	extracellular	69.82	70.25
Os07t0694300-01	Rice	cytosol, extracellular	57.93	64.41
TraesCS2B01G098100.1	Wheat	extracellular	60.06	59.34
TraesCS2D01G082100.1	Wheat	extracellular	60.98	59.0
TraesCS2B01G098400.1	Wheat	extracellular	60.37	58.58
EES18091	Sorghum	extracellular	60.67	58.36
TraesCS2B01G098200.1	Wheat	extracellular	56.4	58.18
TraesCS2B01G098600.1	Wheat	extracellular	60.37	58.06
TraesCS2B01G098700.1	Wheat	extracellular	59.45	58.04
TraesCS2D01G081900.1	Wheat	extracellular	59.45	57.52
HORVU2Hr1G013740.1	Barley	extracellular	21.95	55.38
VIT_10s0116g01780.t01	Wine grape	extracellular	56.1	55.09
TraesCS2A01G084100.1	Wheat	plastid	60.98	52.08
TraesCS2A01G083900.1	Wheat	plastid	60.98	52.08
VIT_05s0077g00880.t01	Wine grape	extracellular	28.35	28.62

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100256842	wikigene:100256842	MapMan:35.1
ProteinID:CBI32706	ProteinID:CBI32706.3	UniProt:D7TQI6	EMBL:FN596008	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009505	GO:GO:0009506	GO:GO:0009605	GO:GO:0009607
GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491	GO:GO:0020037	GO:GO:0030312
GO:GO:0042744	GO:GO:0046872	GO:GO:0050832	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	EntrezGene:LOC100256842	wikigene:LOC100256842	PFAM:PF00141	PRINTS:PR00458
PRINTS:PR00461	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF11	InterPro:Peroxidase_pln	SUPFAM:SSF48113
InterPro:Secretory_peroxidase	TMHMM:TMhelix	UniParc:UPI0001983D26	ArrayExpress:VIT_08s0040g02200	EnsemblPlantsGene:VIT_08s0040g02200	EnsemblPlants:VIT_08s0040g02200.t01
RefSeq:XP_002275288	RefSeq:XP_002275288.1	:	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:D7TQI6]

Coordinates

chr8:+:13311735..13313150

Molecular Weight (calculated)

36945.9 Da

IEP (calculated)

5.410

GRAVY (calculated)

-0.309

Length

328 amino acids

Sequence
(BLAST)

001: MARNRRQLSD PGITFLFLAL LLHFYSGTSV LQLNYYSESC PRAEEIIKQQ VVNLYHKHGN TAVSWIRNLF HDCMVKSCDA SLLLETARGV ESEKLSSRSF
101: GMRNFKYIDT IKKAVESECP QTVSCADIVV LSARDGFELL GGPYIEMKTG RRDSKESYAT VVEDSIPNHN DSMSLVLSRF QSIGIDAEGT VALLGAHSVG
201: RVHCVNVVNR LYPTVDPTLD PEYAEYLERR CPSPEPDPKA VQYARNDLET PMVLDNMYYK NILSHKGLLL VDQQLVSDPT TSPFVEKMAD DNGYFHDQFS
301: RALLLLSENN PLTGDDGEIR KDCRYVNV

Best Arabidopsis Sequence Match ( AT2G37130.1 )
(BLAST)

001: MANAKPFCLL GFFCLLLQLF SIFHIGNGEL EMNYYKESCP KAEEIIRQQV ETLYYKHGNT AVSWLRNLFH DCVVKSCDAS LLLETARGVE SEQKSKRSFG
101: MRNFKYVKII KDALEKECPS TVSCADIVAL SARDGIVMLK GPKIEMIKTG RRDSRGSYLG DVETLIPNHN DSLSSVISTF NSIGIDVEAT VALLGAHSVG
201: RVHCVNLVHR LYPTIDPTLD PSYALYLKKR CPSPTPDPNA VLYSRNDRET PMVVDNMYYK NIMAHKGLLV IDDELATDPR TAPFVAKMAA DNNYFHEQFS
301: RGVRLLSETN PLTGDQGEIR KDCRYVN

Arabidopsis Description

PER21Peroxidase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q42580]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.