Factsheet for GSMUA_Achr3P13770_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr2P15100_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37130.1	GSMUA_Achr2P15100_001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0040g02200.t01	Wine grape	extracellular	70.25	69.82
Solyc09g007520.2.1	Tomato	extracellular	66.87	67.28
KRH32430	Soybean	extracellular	67.18	66.97
PGSC0003DMT400004447	Potato	extracellular	66.26	66.67
KRH19837	Soybean	extracellular	66.56	65.96
Os07t0694300-01	Rice	cytosol, extracellular	59.51	65.76
Bra023099.1-P	Field mustard	extracellular	65.64	64.85
CDY46756	Canola	extracellular	65.64	64.85
CDX79717	Canola	extracellular	65.34	64.55
AT2G37130.1	Thale cress	extracellular	64.72	64.53
Bra017206.1-P	Field mustard	extracellular	64.42	64.02
CDY55434	Canola	extracellular	64.42	64.02
PGSC0003DMT400027130	Potato	extracellular	63.19	62.61
Solyc10g084240.1.1	Tomato	extracellular	62.88	62.31
TraesCS2B01G098100.1	Wheat	extracellular	62.27	61.14
TraesCS2B01G098200.1	Wheat	extracellular	57.67	59.12
TraesCS2D01G082100.1	Wheat	extracellular	61.35	59.0
TraesCS2B01G098700.1	Wheat	extracellular	60.74	58.93
TraesCS2B01G098400.1	Wheat	extracellular	61.04	58.88
TraesCS2B01G098600.1	Wheat	extracellular	60.74	58.06
TraesCS2D01G081900.1	Wheat	extracellular	60.12	57.82
EES18091	Sorghum	extracellular	58.59	56.01
HORVU2Hr1G013740.1	Barley	extracellular	21.78	54.62
TraesCS2A01G083900.1	Wheat	plastid	62.27	52.86
TraesCS2A01G084100.1	Wheat	plastid	62.27	52.86

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037
GO:GO:0042744	GO:GO:0046872	GO:GO:0050832	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSMUA_Achr3G13770_001
EnsemblPlants:GSMUA_Achr3P13770_001	EnsemblPlants:GSMUA_Achr3T13770_001	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:M0SEE4
PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF11
InterPro:Peroxidase_pln	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	UniParc:UPI0002963398	:

Description

Peroxidase 21 [Source:GMGC_GENE;Acc:GSMUA_Achr3G13770_001]

Coordinates

chr3:-:12438147..12439664

Molecular Weight (calculated)

36195.5 Da

IEP (calculated)

6.704

GRAVY (calculated)

-0.183

Length

326 amino acids

Sequence
(BLAST)

001: MELGATPMTA FLILVCLSAL LRGEGGGLKL NYYSKSCPRA EEIVKREVVK LYNEHGNTAV SWVRNLFHDC MVESCDASLL LETTDSLISE QSADRSFGMR
101: NFKYVAPIKE ALEKECPATV SCADIIALSA REGVVMLGGP FIPMRTGRRD SKESHADVID KDIPNHNDSI SLVLSRFRSI GIDAERTVAL LGAHSVGRVH
201: CVNLVGRLYP TVDPTIDPEY AKYLLGRCPS PNPDPEAVLY SRNDRETPMI IDNVYYKNLL HHKGLLKVDQ QLVSYPSTAQ FVKLMAADNS YFYDQFSKAL
301: LLLSENNPLT GNKGEVRKDC RYVNAG

Best Arabidopsis Sequence Match ( AT2G37130.1 )
(BLAST)

001: MANAKPFCLL GFFCLLLQLF SIFHIGNGEL EMNYYKESCP KAEEIIRQQV ETLYYKHGNT AVSWLRNLFH DCVVKSCDAS LLLETARGVE SEQKSKRSFG
101: MRNFKYVKII KDALEKECPS TVSCADIVAL SARDGIVMLK GPKIEMIKTG RRDSRGSYLG DVETLIPNHN DSLSSVISTF NSIGIDVEAT VALLGAHSVG
201: RVHCVNLVHR LYPTIDPTLD PSYALYLKKR CPSPTPDPNA VLYSRNDRET PMVVDNMYYK NIMAHKGLLV IDDELATDPR TAPFVAKMAA DNNYFHEQFS
301: RGVRLLSETN PLTGDQGEIR KDCRYVN

Arabidopsis Description

PER21Peroxidase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q42580]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.