CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY03088
CDY17621

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37130.1	CDY03088	AT2G01950.1	19000166
AT2G37130.1	CDY17621	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017206.1-P	Field mustard	extracellular	99.39	99.39
CDY46756	Canola	extracellular	93.6	93.03
CDX79717	Canola	extracellular	93.29	92.73
AT2G37130.1	Thale cress	extracellular	85.37	85.63
KRH19837	Soybean	extracellular	71.65	71.43
VIT_08s0040g02200.t01	Wine grape	extracellular	71.04	71.04
KRH32430	Soybean	extracellular	70.73	70.95
Solyc09g007520.2.1	Tomato	extracellular	68.6	69.44
PGSC0003DMT400004447	Potato	extracellular	67.99	68.83
PGSC0003DMT400027130	Potato	extracellular	65.24	65.05
Solyc10g084240.1.1	Tomato	extracellular	64.63	64.44
GSMUA_Achr3P13770_001	Banana	extracellular	64.02	64.42
Os07t0694300-01	Rice	cytosol, extracellular	55.79	62.03
TraesCS2B01G098100.1	Wheat	extracellular	59.45	58.73
TraesCS2B01G098200.1	Wheat	extracellular	55.49	57.23
TraesCS2D01G082100.1	Wheat	extracellular	59.15	57.23
TraesCS2B01G098700.1	Wheat	extracellular	58.54	57.14
TraesCS2D01G081900.1	Wheat	extracellular	58.84	56.93
TraesCS2B01G098600.1	Wheat	extracellular	59.15	56.89
TraesCS2B01G098400.1	Wheat	extracellular	58.54	56.8
HORVU2Hr1G013740.1	Barley	extracellular	21.95	55.38
EES18091	Sorghum	extracellular	56.71	54.55
CDX79113	Canola	extracellular	53.66	53.17
CDX82887	Canola	extracellular	53.66	53.17
TraesCS2A01G084100.1	Wheat	plastid	60.06	51.3
TraesCS2A01G083900.1	Wheat	plastid	60.06	51.3
CDX92114	Canola	extracellular	28.66	27.81
CDX95885	Canola	extracellular	28.66	27.81

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:A0A078J126	UniProt:A0A078J126
EnsemblPlants:CDY55434	ProteinID:CDY55434	ProteinID:CDY55434.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0042744
GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSBRNA2T00016831001	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	PFscan:PS50873	PANTHER:PTHR31235
PANTHER:PTHR31235:SF11	MetaCyc:PWY-5461	MetaCyc:PWY-7214	MetaCyc:PWY-7445	InterPro:Peroxidase_pln	SUPFAM:SSF48113
InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EE7325	SEG:seg	:

Description

BnaA04g29190DPeroxidase [Source:UniProtKB/TrEMBL;Acc:A0A078J126]

Coordinates

chrLK033402:-:14500..16497

Molecular Weight (calculated)

37041.8 Da

IEP (calculated)

7.912

GRAVY (calculated)

-0.202

Length

328 amino acids

Sequence
(BLAST)

001: MAIVKMPFCF LAFFCLLLQL FSIFHIGNAE LKMNYYRESC PRAEEIIRQQ VETLYYKHGN TAVSWLRNLF HDCVVKSCDA SLLLETARGV ESEQKSTRSF
101: GMRNFKYIKT IKDALEKECP GTVSCADIVA LSARDGIVML KGPKIDMIKT GRRDSRGSYL RDVEALVPNH NDSLSSVLSN FNSIGIDVEA TVALLGAHSV
201: GRVHCVNLVH RLYPTIDPTL DPTYALYLKK RCPTPNPNPK EVLYSRNDPE TPMVVDNMYY KNIMAHKGLL VIDDEIATDP RTAPFVAKMA ADNGYFHEQF
301: SRAIRLLSET NPLTGDQGEI RKDCRYVN

Best Arabidopsis Sequence Match ( AT2G37130.1 )
(BLAST)

001: MANAKPFCLL GFFCLLLQLF SIFHIGNGEL EMNYYKESCP KAEEIIRQQV ETLYYKHGNT AVSWLRNLFH DCVVKSCDAS LLLETARGVE SEQKSKRSFG
101: MRNFKYVKII KDALEKECPS TVSCADIVAL SARDGIVMLK GPKIEMIKTG RRDSRGSYLG DVETLIPNHN DSLSSVISTF NSIGIDVEAT VALLGAHSVG
201: RVHCVNLVHR LYPTIDPTLD PSYALYLKKR CPSPTPDPNA VLYSRNDRET PMVVDNMYYK NIMAHKGLLV IDDELATDPR TAPFVAKMAA DNNYFHEQFS
301: RGVRLLSETN PLTGDQGEIR KDCRYVN

Arabidopsis Description

PER21Peroxidase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q42580]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.