CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY03088
CDY17621

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G37130.1	CDY03088	AT2G01950.1	19000166
AT2G37130.1	CDY17621	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra023099.1-P	Field mustard	extracellular	99.7	99.7
CDY46756	Canola	extracellular	99.7	99.7
CDY55434	Canola	extracellular	92.73	93.29
AT2G37130.1	Thale cress	extracellular	87.27	88.07
VIT_08s0040g02200.t01	Wine grape	extracellular	70.3	70.73
Solyc09g007520.2.1	Tomato	extracellular	69.39	70.68
KRH19837	Soybean	extracellular	70.3	70.52
KRH32430	Soybean	extracellular	69.39	70.03
PGSC0003DMT400004447	Potato	extracellular	68.18	69.44
PGSC0003DMT400027130	Potato	extracellular	65.15	65.35
GSMUA_Achr3P13770_001	Banana	extracellular	64.55	65.34
Solyc10g084240.1.1	Tomato	extracellular	64.85	65.05
Os07t0694300-01	Rice	cytosol, extracellular	55.76	62.37
TraesCS2B01G098100.1	Wheat	extracellular	60.61	60.24
TraesCS2B01G098200.1	Wheat	extracellular	56.97	59.12
TraesCS2D01G082100.1	Wheat	extracellular	60.3	58.7
TraesCS2B01G098700.1	Wheat	extracellular	59.7	58.63
TraesCS2D01G081900.1	Wheat	extracellular	60.0	58.41
TraesCS2B01G098600.1	Wheat	extracellular	60.3	58.36
TraesCS2B01G098400.1	Wheat	extracellular	59.7	58.28
HORVU2Hr1G013740.1	Barley	extracellular	22.12	56.15
EES18091	Sorghum	extracellular	57.58	55.72
TraesCS2A01G083900.1	Wheat	plastid	61.21	52.6
TraesCS2A01G084100.1	Wheat	plastid	61.21	52.6
CDX79113	Canola	extracellular	52.73	52.57
CDX82887	Canola	extracellular	52.73	52.57
CDX92114	Canola	extracellular	27.27	26.63
CDX95885	Canola	extracellular	27.27	26.63

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:A0A078CSJ1	EnsemblPlants:CDX79717
ProteinID:CDX79717	ProteinID:CDX79717.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0020037	GO:GO:0042744	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00132529001	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	PFscan:PS50873	PANTHER:PTHR31235
PANTHER:PTHR31235:SF11	MetaCyc:PWY-5461	MetaCyc:PWY-7214	MetaCyc:PWY-7445	InterPro:Peroxidase_pln	SUPFAM:SSF48113
InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00018C70E4	SEG:seg	:

Description

BnaC03g20530D

Coordinates

chrLK031818:-:1874954..1876743

Molecular Weight (calculated)

37149.6 Da

IEP (calculated)

6.970

GRAVY (calculated)

-0.244

Length

330 amino acids

Sequence
(BLAST)

001: MANAKMPFCL LAFFCLLLQL FSIFHIGNAE LEMNYYRESC PRAEEIIRQQ VETLYYKHGN TAVSWLRNLF HDCVVKSCDA SLLLETARGV ESEQKSTRSF
101: GMRNFKYVKV IKDALEKECP STVSCADIVA LSARDGIVML KGPKIDMIKT GRRDSRGSYL SDVETLVPNH NDSLSSVLSN FNSMGIDVEA TVALLGAHSV
201: GRVHCVNLVH RLYPTIDPTL DPDYALYLKN RCPSPNPDPN AVLYSRNDRE TPMVVDNMYY KNIMAHRGLL VIDDELASDP RTAPFVAKMA ADNGYFHEQF
301: SRGVRLLSET NPLTGDQGEI RKDCRYVNSK

Best Arabidopsis Sequence Match ( AT2G37130.1 )
(BLAST)

001: MANAKPFCLL GFFCLLLQLF SIFHIGNGEL EMNYYKESCP KAEEIIRQQV ETLYYKHGNT AVSWLRNLFH DCVVKSCDAS LLLETARGVE SEQKSKRSFG
101: MRNFKYVKII KDALEKECPS TVSCADIVAL SARDGIVMLK GPKIEMIKTG RRDSRGSYLG DVETLIPNHN DSLSSVISTF NSIGIDVEAT VALLGAHSVG
201: RVHCVNLVHR LYPTIDPTLD PSYALYLKKR CPSPTPDPNA VLYSRNDRET PMVVDNMYYK NIMAHKGLLV IDDELATDPR TAPFVAKMAA DNNYFHEQFS
301: RGVRLLSETN PLTGDQGEIR KDCRYVN

Arabidopsis Description

PER21Peroxidase 21 [Source:UniProtKB/Swiss-Prot;Acc:Q42580]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.